Gene
| Gene Model ID | pfu_aug2.0_7594.1_16275 |
|---|---|
| Locus | scaffold7594.1 : 1 ... 13309 : - |
| To GenomeBrowser | scaffold7594.1:1..13309 |
| Genes list of scaffold | scaffold7594.1 |
| Synonym | pfu_aug1.0_8977.1_31688 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7594.1_16275.t1 | 4 | 1 | zf-C2H2 | 11 | 34 | 1.2e-08 | 34.7 | 2.2e-06 | 0.0032 | 17.6 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 1 | zf-C2H2_4 | 13 | 34 | 2.2e-06 | 27.6 | 2.5e-05 | 0.038 | 14.3 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 2 | zf-C2H2 | 39 | 61 | 1.2e-08 | 34.7 | 1.1e-05 | 0.016 | 15.4 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 2 | zf-C2H2_4 | 39 | 61 | 2.2e-06 | 27.6 | 6.9e-05 | 0.1 | 12.9 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 3 | zf-C2H2 | 74 | 95 | 1.2e-08 | 34.7 | 0.13 | 190.0 | 2.7 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 3 | zf-C2H2_4 | 74 | 91 | 2.2e-06 | 27.6 | 0.097 | 140.0 | 3.1 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 4 | zf-C2H2 | 257 | 280 | 1.2e-08 | 34.7 | 0.00012 | 0.18 | 12.2 |
| pfu_aug2.0_7594.1_16275.t1 | 4 | 4 | zf-C2H2_4 | 257 | 280 | 2.2e-06 | 27.6 | 0.0043 | 6.3 | 7.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7594.1_16275.t1 | gi|625281290|ref|XP_007632311.1| | PREDICTED: hyphally regulated cell wall protein 3-like [Cricetulus griseus] | 1.0e-17 |
| pfu_aug2.0_7594.1_16275.t1 | gi|585664380|ref|XP_006812006.1| | PREDICTED: protein jagged-1b-like, partial [Saccoglossus kowalevskii] | 7.0e-12 |
| pfu_aug2.0_7594.1_16275.t1 | gi|738088952|ref|WP_036047603.1| | Sphingomyelinase C [Leptospira borgpetersenii] | 1.0e-11 |
| pfu_aug2.0_7594.1_16275.t1 | gi|695458551|ref|XP_009537460.1| | hypothetical protein PHYSODRAFT_529597 [Phytophthora sojae] | 1.0e-11 |
| pfu_aug2.0_7594.1_16275.t1 | gi|525004493|ref|XP_005049939.1| | PREDICTED: tudor domain-containing protein 5 [Ficedula albicollis] | 5.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_7594.1_16275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7594.1_16275.t1 agagaaagagagtcaagaggagagaaagaagttcgggtgtaaagagtgccctaaacaatttgataggaaaaatgagttac tggtccatgtacgggcaatccacgaaaatgttcttttcaaatgcggaaaatgcgacaaaggatttgcgtatcaaacaaat agagtgaggcacgaaaagaaatgtcagggaccacctaaaacgtcaactgtaaagggcatcaaatgccgtttatgtgacaa ggttcttacaggacacaagcaaataagattacacaacagtgaacataaatctggaaagactgacagcataccacaaatcg caacacgtgagaacagcatactacaagaccaaacatgtgagaacagcataccacaagaccaaacatgtgataacagcata ccacaagtcccaacatgcgagaacagcataccacaaatcccaacatgcgagaacagcataccacaagaccaaacatgtga gaacaggataccacaagtcccaacatgcgagaacagcataccacaagaccaaacatgtgagaacaggataccacaagtgc caacatgcgagaacagcataccacaataccaaacatgtgagaacaggataccacaagtcccaacatgcgagaacagcata ccacaagtcccaacatgcgagaacagcttaccacaataccaaacatgtgagaacacagatatggagatagcaggaccctc tacagtccagtctagcagtatccccatagcaaaatatccaagtaaagagtacagatgtcggacttgcaacgaacgttttc aaagtagacgtgaattgtatcttcacaggaataccgaacaccaatcaggaaagggcccgattgcagacatagtcatccca gaggaccagaacgaacaattcaaagtggtctataaagccaatatcaaattcatttatgaagaggtcacagacgatggg |
|
Protein
| Protein ID | pfu_aug2.0_7594.1_16275.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7594.1_16275.t1 EKESQEERKKFGCKECPKQFDRKNELLVHVRAIHENVLFKCGKCDKGFAYQTNRVRHEKKCQGPPKTSTVKGIKCRLCDK VLTGHKQIRLHNSEHKSGKTDSIPQIATRENSILQDQTCENSIPQDQTCDNSIPQVPTCENSIPQIPTCENSIPQDQTCE NRIPQVPTCENSIPQDQTCENRIPQVPTCENSIPQYQTCENRIPQVPTCENSIPQVPTCENSLPQYQTCENTDMEIAGPS TVQSSSIPIAKYPSKEYRCRTCNERFQSRRELYLHRNTEHQSGKGPIADIVIPEDQNEQFKVVYKANIKFIYEEVTDDG |
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