Gene
| Gene Model ID | pfu_aug2.0_7614.1_16277 |
|---|---|
| Locus | scaffold7614.1 : 1 ... 2666 : + |
| To GenomeBrowser | scaffold7614.1:1..2666 |
| Genes list of scaffold | scaffold7614.1 |
| Synonym | pfu_aug1.0_1739.1_15599 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7614.1_16277.t1 | 1 | 1 | Ribosomal_L1 | 4 | 58 | 1.3e-07 | 31.1 | 1.1e-11 | 1.7e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7614.1_16277.t1 | gi|524871304|ref|XP_005092425.1| | PREDICTED: 39S ribosomal protein L1, mitochondrial-like isoform X2 [Aplysia californica] | 2.0e-08 |
| pfu_aug2.0_7614.1_16277.t1 | gi|524871301|ref|XP_005092424.1| | PREDICTED: 39S ribosomal protein L1, mitochondrial-like isoform X1 [Aplysia californica] | 2.0e-08 |
| pfu_aug2.0_7614.1_16277.t1 | gi|759058457|ref|XP_011338462.1| | PREDICTED: uncharacterized protein LOC105280001 [Cerapachys biroi] | 2.0e-06 |
| pfu_aug2.0_7614.1_16277.t1 | gi|195108505|ref|XP_001998833.1| | GI24185 [Drosophila mojavensis] | 3.0e-06 |
| pfu_aug2.0_7614.1_16277.t1 | gi|195394473|ref|XP_002055867.1| | GJ10532 [Drosophila virilis] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_7614.1_16277.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7614.1_16277.t1 gaactgtctcggatgacatacagggcatgttagaaaagtttaagtatgctgtcttctattcatcaaataaagaagggaga aaaggaacaatgcagatccagattggcacacttgatatgccagatgaacacctgaaagagaacttggaaattatcattaa tgctatttcctcaaagtatagaaatacaccactaattgatggaatgagagtacttgtgcctccttcaccggagcaattct tattagacaacgctctctatgtgcctaacattgaatcaaagactgttaaaaaagacctaaatcctggaaaaggtgaaaat gttcctgatattgaaggtgttggtgatattgatgaagacgttaaaaatgtgggaactgccatatga |
|
Protein
| Protein ID | pfu_aug2.0_7614.1_16277.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7614.1_16277.t1 TVSDDIQGMLEKFKYAVFYSSNKEGRKGTMQIQIGTLDMPDEHLKENLEIIINAISSKYRNTPLIDGMRVLVPPSPEQFL LDNALYVPNIESKTVKKDLNPGKGENVPDIEGVGDIDEDVKNVGTAI |
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