Gene
| Gene Model ID | pfu_aug2.0_7614.1_16278 |
|---|---|
| Locus | scaffold7614.1 : 4688 ... 13243 : - |
| To GenomeBrowser | scaffold7614.1:4688..13243 |
| Genes list of scaffold | scaffold7614.1 |
| Synonym | pfu_aug1.0_12488.1_46509 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutamate mitochondrial | GO:0004352 GO:0004353 GO:0005524 GO:0005525 GO:0005759 GO:0006537 GO:0006538 GO:0006541 GO:0021762 GO:0032024 GO:0034641 GO:0042802 GO:0043531 GO:0055114 GO:0070403 GO:0070728 GO:0072350 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7614.1_16278.t1 | 1 | 1 | ELFV_dehydrog_N | 7 | 101 | 6.9e-34 | 116.2 | 6.2e-38 | 9.3e-34 | 115.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7614.1_16278.t1 | gi|657753317|ref|XP_008312154.1| | PREDICTED: glutamate dehydrogenase, mitochondrial [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_7614.1_16278.t1 | gi|62088392|dbj|BAD92643.1| | glutamate dehydrogenase 1 variant [Homo sapiens] | 0.0 |
| pfu_aug2.0_7614.1_16278.t1 | gi|727021698|ref|XP_010399155.1| | PREDICTED: glutamate dehydrogenase 1, mitochondrial [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_7614.1_16278.t1 | gi|657586840|ref|XP_008297684.1| | PREDICTED: glutamate dehydrogenase, mitochondrial [Stegastes partitus] | 0.0 |
| pfu_aug2.0_7614.1_16278.t1 | gi|620973925|ref|XP_007655099.1| | PREDICTED: glutamate dehydrogenase 1, mitochondrial-like [Ornithorhynchus anatinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7614.1_16278.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7614.1_16278.t1 attataattgtggaattttaacaggaattcgatttagtatggatgtttgtgaggatgaggtgaaagccttagctgcattg atgacctataagtgtgcggtggtggatgtaccgtttggtggggctaaagcaggagtgatgatcaatccacgagaatactc agaaagagagctggaaaaaatcacccgcagattcaccttggacatggcaagaaaaagtttcataggaccacaccttgatg tccctgcccctgacatgggtaccggagaacgagaaatggcctggattgctgatacttatgccaacactattggttctgga gatatcaatgctcatgcctgtgtgaccggtaaaccaattacacaaggagggatccacggtcgagtgtccgcaacaggaag gggagtttaccatggcattgagaactttattatggacgctagctacatgagtatgattgggctgactccaggattcaaag acaagaccttcatcctacagaattcagtagaattttaa |
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Protein
| Protein ID | pfu_aug2.0_7614.1_16278.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7614.1_16278.t1 YNCGILTGIRFSMDVCEDEVKALAALMTYKCAVVDVPFGGAKAGVMINPREYSERELEKITRRFTLDMARKSFIGPHLDV PAPDMGTGEREMAWIADTYANTIGSGDINAHACVTGKPITQGGIHGRVSATGRGVYHGIENFIMDASYMSMIGLTPGFKD KTFILQNSVEF |
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