Gene
| Gene Model ID | pfu_aug2.0_762.1_07853 |
|---|---|
| Locus | scaffold762.1 : 73246 ... 86364 : + |
| To GenomeBrowser | scaffold762.1:73246..86364 |
| Genes list of scaffold | scaffold762.1 |
| Synonym | pfu_aug1.0_1282.1_07863 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_762.1_07853.t1 | 3 | 1 | VWA_3 | 36 | 192 | 8.8e-10 | 38.4 | 1.1e-08 | 3.2e-05 | 23.6 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 1 | VWA | 37 | 209 | 0.0 | 276.8 | 5.49996e-41 | 1.6e-37 | 128.9 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 1 | VWA_2 | 37 | 210 | 1.0e-24 | 87.6 | 3.3e-17 | 9.8e-14 | 51.8 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 2 | VWA | 277 | 446 | 0.0 | 276.8 | 3.4e-30 | 1.0e-26 | 93.7 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 2 | VWA_2 | 277 | 449 | 1.0e-24 | 87.6 | 1.8e-06 | 0.0055 | 16.8 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 2 | VWA_3 | 333 | 346 | 8.8e-10 | 38.4 | 0.14 | 410.0 | 0.5 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 3 | VWA | 476 | 641 | 0.0 | 276.8 | 2.2e-19 | 6.6e-16 | 58.5 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 3 | VWA_3 | 477 | 617 | 8.8e-10 | 38.4 | 0.00016 | 0.48 | 10.1 |
| pfu_aug2.0_762.1_07853.t1 | 3 | 3 | VWA_2 | 491 | 626 | 1.0e-24 | 87.6 | 3.0e-06 | 0.0089 | 16.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_762.1_07853.t1 | gi|676449261|ref|XP_009051998.1| | hypothetical protein LOTGIDRAFT_231577 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_762.1_07853.t1 | gi|524911644|ref|XP_005110682.1| | PREDICTED: collagen alpha-4(VI) chain-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_762.1_07853.t1 | gi|676449264|ref|XP_009051999.1| | hypothetical protein LOTGIDRAFT_115133, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_762.1_07853.t1 | gi|676477978|ref|XP_009061283.1| | hypothetical protein LOTGIDRAFT_234764 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_762.1_07853.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07853.t1 atggagttttctatttgcatttcatgcatctttctacaaatagttttaactgtcgctcaggataacagattaaaagataa tgagtattattgcggtaataagccagcagatgtggcgtttttactggattcctccaatagtatttggggacctgactttt acaaacaaattcaatttgtccgtgacgtagtgtcaatatttgacatcagagaaaacactaccagagtcagtgtagcgact ttttcaacagatgtaaacattgaattccaattaaacagtttttcgaacaaaagaagggttctaagggcgataagcagtat caggaagggaatttctgatggcttcgcaacgaataccaacagagctattttccgcatgcgcaaacggatcttcaaaaaac gtaacggcgcaagaccgggagttccaaaaataggcattattctgactgatggacagagtttcaacatgttgatgacagcc tgggaggcggccaaggccaaaagggagaacattcacctatttgcaatcggcattggtgccaggacgaattcaagagaact caaaatgattgccagtcgtcctacacgtgaatactatttcaaagtagatagctacggagctttggatgccataaagaaca ttcttgctgtacggacgtgtaaagtaacaacaccaaagccacccccgacgactacaacgacgacaactacgacgactacc acaacgacaactacgacaccggcaccaactaccactacaaccacacctaccaccaccactacgtcactccttgaagtcgc caggcgagtatgtgctaatggcgtgagcgacatcgtctttgcgtttgattcctctaccacagtttcggatcgtgacttcc ggaatcagatacaatttgctaaagacatcacaaataatttgaatatagaacctaatggaaccagggtaggtgcgatcctc tattccgatcaaattgtcaacatcatgaatatgaatgaacataacgatcgagatgacattacatcaacgctggataaaac cgtacgatcagccggaaggaatagactcgatttggctttgaagtatattagaaccgtaagcttccggcgaggattagcta gagagcgtgcggcacaactggcgatcgtttttacatccaaaccgaccatgtatattcataatacaaaaaaacaatcccat aggacaagagaatccggaattgcagtcattccaataagtataggaagggtcacagaagatgagatgattgctatttccgg aacaacagattcatctaaatatttcaagctttcatctactgatgagttgaattctgtcttggccgagctttcaattgaag cttgcagagttcccgaacctgtgatatctatatcggatcaatcctgtggttctaggcaagaagcagatatcatgtttatt ctggatagtgtaaatgccggaagaaaaaataccaaaaaggttctagcatttatgaaggacttggttgatgaacttgacgt tgacccgaaaaagatccaggtaggcctaatgtcggcagagtgtcaagacgacaacacgggattccagctgaactccaata ctaacaacgaggaagtgacgaaagctctatccaaggtcaaaggagtcgatttatctggtatgctgaagcaaatgaggaga ggagcttacagccataacaaaggagggcggaaggaagcgaaaaagatcgccattttgattgttgacggaagtctggatga gccaatcagaacgctgacagaagcacagcgtgctcgtatccatggagtcgaggtgatagtgatacaagtaggtcaggagg agccgcaggaggagcttctcatgatgtgtgatgcgcctaaaaaacagcacttcttcaaagtcccacattataaccaacta ccaggcatgaaggacagactgtggcaagctatctgtgacgatcagggtcaaaactttcgtcagaagcatgaaaatagcat cggatga |
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Protein
| Protein ID | pfu_aug2.0_762.1_07853.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07853.t1 MEFSICISCIFLQIVLTVAQDNRLKDNEYYCGNKPADVAFLLDSSNSIWGPDFYKQIQFVRDVVSIFDIRENTTRVSVAT FSTDVNIEFQLNSFSNKRRVLRAISSIRKGISDGFATNTNRAIFRMRKRIFKKRNGARPGVPKIGIILTDGQSFNMLMTA WEAAKAKRENIHLFAIGIGARTNSRELKMIASRPTREYYFKVDSYGALDAIKNILAVRTCKVTTPKPPPTTTTTTTTTTT TTTTTTPAPTTTTTTPTTTTTSLLEVARRVCANGVSDIVFAFDSSTTVSDRDFRNQIQFAKDITNNLNIEPNGTRVGAIL YSDQIVNIMNMNEHNDRDDITSTLDKTVRSAGRNRLDLALKYIRTVSFRRGLARERAAQLAIVFTSKPTMYIHNTKKQSH RTRESGIAVIPISIGRVTEDEMIAISGTTDSSKYFKLSSTDELNSVLAELSIEACRVPEPVISISDQSCGSRQEADIMFI LDSVNAGRKNTKKVLAFMKDLVDELDVDPKKIQVGLMSAECQDDNTGFQLNSNTNNEEVTKALSKVKGVDLSGMLKQMRR GAYSHNKGGRKEAKKIAILIVDGSLDEPIRTLTEAQRARIHGVEVIVIQVGQEEPQEELLMMCDAPKKQHFFKVPHYNQL PGMKDRLWQAICDDQGQNFRQKHENSIG |
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