Gene
| Gene Model ID | pfu_aug2.0_762.1_07856 |
|---|---|
| Locus | scaffold762.1 : 100526 ... 105214 : + |
| To GenomeBrowser | scaffold762.1:100526..105214 |
| Genes list of scaffold | scaffold762.1 |
| Synonym | pfu_aug1.0_1282.1_07860 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| matrix metalloproteinase-19-like | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_762.1_07856.t1 | 1 | 1 | PG_binding_1 | 36 | 92 | 7.5e-10 | 38.6 | 1.7e-12 | 2.3e-09 | 37.0 |
| pfu_aug2.0_762.1_07856.t1 | 2 | 1 | Peptidase_M10 | 123 | 276 | 0.0 | 173.7 | 0.0 | 0.0 | 173.0 |
| pfu_aug2.0_762.1_07856.t1 | 4 | 1 | Hemopexin | 309 | 339 | 5.0e-31 | 106.1 | 9.7e-05 | 0.13 | 12.0 |
| pfu_aug2.0_762.1_07856.t1 | 4 | 2 | Hemopexin | 356 | 392 | 5.0e-31 | 106.1 | 4.2e-10 | 5.6e-07 | 29.1 |
| pfu_aug2.0_762.1_07856.t1 | 4 | 3 | Hemopexin | 399 | 448 | 5.0e-31 | 106.1 | 1.6e-11 | 2.2e-08 | 33.7 |
| pfu_aug2.0_762.1_07856.t1 | 4 | 4 | Hemopexin | 451 | 493 | 5.0e-31 | 106.1 | 9.7e-11 | 1.3e-07 | 31.2 |
| pfu_aug2.0_762.1_07856.t1 | 2 | 2 | Peptidase_M10 | 467 | 485 | 0.0 | 173.7 | 7.3 | 9800.0 | -3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_762.1_07856.t1 | gi|676448853|ref|XP_009051864.1| | hypothetical protein LOTGIDRAFT_231475 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_762.1_07856.t1 | gi|260820268|ref|XP_002605457.1| | hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_762.1_07856.t1 | gi|157423149|gb|AAI53751.1| | LOC100127631 protein [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_762.1_07856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07856.t1 atggattctaaagttttatacatacttattcttagcgggattttgaacgtgggatactgcggtgtcataaaggataagac ggaggatcctaatactttaatagacatagatggatatttggagaaatacgggtacatggagtcacgccctccattcgaga cggaagaggagatccttaacagtgatgcatacagaaaagctgctataaggaagtttcagagttttgctggtcttgatgcc acaggggtattaaatgacgccaccatagacgccatgaggaaacctcgatgtggagtcaaagacatacagacacccgagga agtagcacaggcagacagaccgttaaacttctacgcgccaggatataaatggccaagtaaagcaataacatggagagcat cacgacccaccagaaaactctccgaagctacacaaaggtatgcctttgagaatgctttcaagtactggtctgacgtcact cccctgaagtttgagtacacttacggtgaaccggatattgatatccagtttgcggtgcgtgatcatggtgacggacgata caatgcttttgatggaaaaggtggtgttcttgcgcatgcctactacccaaccaatggggacacacatttcgatgacgaag agagctgggtattcaggaaaaatgaaggtactgatatcgagacagtggccgcccatgagtttggacacgcccttggactt ggacactcaagtgagcccaaatctctgatggccccattctaccaaggatttaaccctgacttcaaacttcacgaggacga cattaggggaatacagtcactttacggtaccaaggatggggaaatcacaactactcatgctccaactaccacttcctccg gaaatgacgtaaccccagtgtcaccaactgtgtgcaacatgaaattcgatgctatgaccttaggaccggatgggtttacc tatgtattcagaaacaagactgtttaccgccttaataataccggggtagtagccaccatgctttcccgccatgtataccc cggggctcctagatctccaggggctgctgtgtacattgacaacacaaagaagactttcatatttaaaggacgtcgtatat ggaaatacacaggattccagatggacgctgactatcctatcaccattactgactctaactatcctaccagaatccatgct gcaatagcattcaaaagcaccgggagtacagcacaacaaatatacctcttcaacgataactctttttgggagtttaatcc gaacacaaacagtatagtgccaggatttcctctgaccatttcgggtttctggaggggaatccccgctgggatagaggcag ccatacaatggacagatggcgacatctacttcttcaagggagataagtatagacgctttgacgcagaccgtcgtacattg acgaagggatacccaaaagacaaggcccctgcctggttaggaagtgtctgtggtagtgcccctaagtaa |
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Protein
| Protein ID | pfu_aug2.0_762.1_07856.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07856.t1 MDSKVLYILILSGILNVGYCGVIKDKTEDPNTLIDIDGYLEKYGYMESRPPFETEEEILNSDAYRKAAIRKFQSFAGLDA TGVLNDATIDAMRKPRCGVKDIQTPEEVAQADRPLNFYAPGYKWPSKAITWRASRPTRKLSEATQRYAFENAFKYWSDVT PLKFEYTYGEPDIDIQFAVRDHGDGRYNAFDGKGGVLAHAYYPTNGDTHFDDEESWVFRKNEGTDIETVAAHEFGHALGL GHSSEPKSLMAPFYQGFNPDFKLHEDDIRGIQSLYGTKDGEITTTHAPTTTSSGNDVTPVSPTVCNMKFDAMTLGPDGFT YVFRNKTVYRLNNTGVVATMLSRHVYPGAPRSPGAAVYIDNTKKTFIFKGRRIWKYTGFQMDADYPITITDSNYPTRIHA AIAFKSTGSTAQQIYLFNDNSFWEFNPNTNSIVPGFPLTISGFWRGIPAGIEAAIQWTDGDIYFFKGDKYRRFDADRRTL TKGYPKDKAPAWLGSVCGSAPK |
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