Gene
| Gene Model ID | pfu_aug2.0_762.1_07857 |
|---|---|
| Locus | scaffold762.1 : 105906 ... 109409 : + |
| To GenomeBrowser | scaffold762.1:105906..109409 |
| Genes list of scaffold | scaffold762.1 |
| Synonym | pfu_aug1.0_91643.1_06169 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha-n- partial | GO:0004553 GO:0005737 GO:0005975 GO:0019377 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_762.1_07857.t1 | 2 | 1 | Melibiase | 24 | 121 | 3.1e-13 | 49.1 | 4.1e-16 | 2.0e-12 | 46.5 |
| pfu_aug2.0_762.1_07857.t1 | 2 | 2 | Melibiase | 138 | 187 | 3.1e-13 | 49.1 | 0.041 | 200.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_762.1_07857.t1 | gi|115764848|ref|XP_792642.2| | 0.0 | |
| pfu_aug2.0_762.1_07857.t1 | gi|663242349|ref|XP_008495808.1| | PREDICTED: alpha-N-acetylgalactosaminidase [Calypte anna] | 0.0 |
| pfu_aug2.0_762.1_07857.t1 | gi|699671296|ref|XP_009900747.1| | PREDICTED: alpha-N-acetylgalactosaminidase [Picoides pubescens] | 0.0 |
| pfu_aug2.0_762.1_07857.t1 | gi|527264583|ref|XP_005150514.1| | PREDICTED: alpha-N-acetylgalactosaminidase, partial [Melopsittacus undulatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_762.1_07857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07857.t1 atgttaggtcttctactcctactcttgattagtccattaaccagttgccttgacaacggtttagcattaacgccgccgat gggatggttgtcatgggaacgattccgatgtaacgtggactgtaagaagcagcctaaagaatgcatcagtgagaatctgt acaaggccatggccgaccgaatggtttctgatggctatatttactatggttacaagtatgttaatattgatgattgttgg gcgtctaaggagagaactccggacggaaagcttgtagcggatccggaaagattccccagtggaatagaagctctcgcaga ctacatgcacgaaagacatctgaaattagggatatacgccgacatcgggacggaaacatgtggtggataccccggaagtc agggtcatctagagcaggacgctgatacgtttgcagaatggggagtggatatgctaaaaatggacggatgttatgctaat aatgaacaattagaagagggtccagattaccaaaggatagcaaactactgtaatatctggagaaattacgatgacgtaga agacacgtgggaaagcgtaaaaaacatcattaacttttacgttaatgataccggaaacttcagctctgtagccggacctg gacatttcaacgacccggatatggtaactgtctgtgagaggggtttgttcatagatctcctggttggtgattatggattg agtattgaacaacagaaggtgcaactagctctgtgggcaataatggccgccccgatgttcatttccgatgatcttagaag tatctcgttcccgtcaaagaatattcttttaaatcacttcatcaggtctgtaagtcaagacccaatgggagtgcagggaa aaagaatcagcaagtctgagttatcgctctttacatgtccagataaacaacatggaattatggacaaagccaatggcacc agacggtaa |
|
Protein
| Protein ID | pfu_aug2.0_762.1_07857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_762.1_07857.t1 MLGLLLLLLISPLTSCLDNGLALTPPMGWLSWERFRCNVDCKKQPKECISENLYKAMADRMVSDGYIYYGYKYVNIDDCW ASKERTPDGKLVADPERFPSGIEALADYMHERHLKLGIYADIGTETCGGYPGSQGHLEQDADTFAEWGVDMLKMDGCYAN NEQLEEGPDYQRIANYCNIWRNYDDVEDTWESVKNIINFYVNDTGNFSSVAGPGHFNDPDMVTVCERGLFIDLLVGDYGL SIEQQKVQLALWAIMAAPMFISDDLRSISFPSKNILLNHFIRSVSQDPMGVQGKRISKSELSLFTCPDKQHGIMDKANGT RR |
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