Gene
| Gene Model ID | pfu_aug2.0_7640.1_02923 |
|---|---|
| Locus | scaffold7640.1 : 1 ... 2975 : + |
| To GenomeBrowser | scaffold7640.1:1..2975 |
| Genes list of scaffold | scaffold7640.1 |
| Synonym | pfu_aug1.0_36864.1_62885 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuromedin-k receptor | GO:0004871 GO:0005488 GO:0005622 GO:0007165 GO:0044459 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7640.1_02923.t1 | 2 | 1 | 7tm_1 | 2 | 79 | 1.1e-32 | 113.1 | 1.9e-14 | 4.0e-11 | 42.5 |
| pfu_aug2.0_7640.1_02923.t1 | 2 | 2 | 7tm_1 | 83 | 240 | 1.1e-32 | 113.1 | 4.1e-25 | 8.6e-22 | 77.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7640.1_02923.t1 | gi|585663769|ref|XP_006811896.1| | PREDICTED: G-protein coupled receptor 54-like [Saccoglossus kowalevskii] | 4.0e-18 |
| pfu_aug2.0_7640.1_02923.t1 | gi|641674204|ref|XP_008186605.1| | PREDICTED: gastrin/cholecystokinin type B receptor-like [Acyrthosiphon pisum] | 5.0e-16 |
| pfu_aug2.0_7640.1_02923.t1 | gi|42627341|emb|CAD67556.1| | neurokinin-3 receptor [Bos taurus] | 1.0e-15 |
| pfu_aug2.0_7640.1_02923.t1 | gi|395847437|ref|XP_003796381.1| | PREDICTED: neuromedin-K receptor [Otolemur garnettii] | 3.0e-15 |
| pfu_aug2.0_7640.1_02923.t1 | gi|113414877|gb|AAI22552.1| | Tachykinin receptor 3 [Homo sapiens] | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_7640.1_02923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7640.1_02923.t1 gtaagctactacgctacataatgatcgtctgtctagcggtaaatgtcatgacgcttgtggcgattggagttgaccgcctc ttggttgttgtgtttccgctgttctcaaaaccatacaggaagaaaaagtatgcctacatttgtgtgattggtctctgggt gatctctttcatcatattcactcctttcctcaacattaccaaggaaataagagtaggcagaccgtactgtatagaacaac tggacgaacacagcaggaagaaaaagtatgcctacatttgtgtgattggtctctgggtgatctccttcatcatattcact cctttcctcaacattaccaaggaaataagagtaggcagaccgtactgtatagaacaactggacgaacacagcaggttcgt gtacgccattctaatgtttgtggtgttctacgctataccacaaatattccttggaacgtgctataccatcatctccctca agctctggaacagcaagtactcaagcgaaatgaatcaagtagccattgtcaccttgaaaatcaagggtaaaatcgtgaaa ctgaccttcgccattatccttgcctttgcggtttgctggttgcccatgcatatcggggctctacttaacgccaagtcagg cggatcggagttcaactactatctacagctctttgcgccatgttttgcctacacaacggtatccttgaatccgattatat attgctttatgtccaagtcactgagaaaaagcttaaaatcagcaatccactgtgatgaccataccataaagcagaggaag gccaagccgcttttacttcaaatgcagatgtga |
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Protein
| Protein ID | pfu_aug2.0_7640.1_02923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7640.1_02923.t1 KLLRYIMIVCLAVNVMTLVAIGVDRLLVVVFPLFSKPYRKKKYAYICVIGLWVISFIIFTPFLNITKEIRVGRPYCIEQL DEHSRKKKYAYICVIGLWVISFIIFTPFLNITKEIRVGRPYCIEQLDEHSRFVYAILMFVVFYAIPQIFLGTCYTIISLK LWNSKYSSEMNQVAIVTLKIKGKIVKLTFAIILAFAVCWLPMHIGALLNAKSGGSEFNYYLQLFAPCFAYTTVSLNPIIY CFMSKSLRKSLKSAIHCDDHTIKQRKAKPLLLQMQM |
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