Gene
| Gene Model ID | pfu_aug2.0_7650.1_02925 |
|---|---|
| Locus | scaffold7650.1 : 1 ... 2391 : + |
| To GenomeBrowser | scaffold7650.1:1..2391 |
| Genes list of scaffold | scaffold7650.1 |
| Synonym | pfu_aug1.0_1485.1_07973 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: dna (cytosine-5)-methyltransferase 1- partial | GO:0003677 GO:0003682 GO:0003886 GO:0005634 GO:0008134 GO:0008270 GO:0090116 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7650.1_02925.t1 | 1 | 1 | DNMT1-RFD | 2 | 52 | 2.8e-11 | 43.2 | 2.5e-15 | 3.8e-11 | 42.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7650.1_02925.t1 | gi|524877141|ref|XP_005095277.1| | PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_7650.1_02925.t1 | gi|524877139|ref|XP_005095276.1| | PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_7650.1_02925.t1 | gi|260806879|ref|XP_002598311.1| | hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_7650.1_02925.t1 | gi|676429820|ref|XP_009045725.1| | hypothetical protein LOTGIDRAFT_171288 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_7650.1_02925.t1 | gi|706122921|ref|XP_010196974.1| | PREDICTED: DNA (cytosine-5)-methyltransferase 1, partial [Colius striatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7650.1_02925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7650.1_02925.t1 agcatatgcggagtatatactgatgtcaccgagcgagatttatcagccgtacatggataccatgaaggagaagatccaca tgagtaaagttgttatagagttcttacagaataaccaggaagctacttacgaagacctgctcaacaaaatacagactaca gtaccacctgcaggattgaccagtcttactgaggactccttactcaggcattcacagttcattgtcgaccaggtacagag ctatgacgaggctgcggctgatgacgagaatcttctaattactacaccgtgtatgagagctctgatcaaactggctggtg tcacactggggaaaaggttcagttgtataaatattatgatgctatga |
|
Protein
| Protein ID | pfu_aug2.0_7650.1_02925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7650.1_02925.t1 AYAEYILMSPSEIYQPYMDTMKEKIHMSKVVIEFLQNNQEATYEDLLNKIQTTVPPAGLTSLTEDSLLRHSQFIVDQVQS YDEAAADDENLLITTPCMRALIKLAGVTLGKRFSCINIMML |
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