Gene
| Gene Model ID | pfu_aug2.0_767.1_24388 |
|---|---|
| Locus | scaffold767.1 : 156696 ... 193973 : + |
| To GenomeBrowser | scaffold767.1:156696..193973 |
| Genes list of scaffold | scaffold767.1 |
| Synonym | pfu_aug1.0_9416.1_09949 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc582782 | GO:0006629 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_767.1_24388.t2 | 3 | 1 | Patatin | 170 | 216 | 3.1e-11 | 43.6 | 4.4e-09 | 3.2e-05 | 23.9 |
| pfu_aug2.0_767.1_24388.t2 | 3 | 2 | Patatin | 229 | 249 | 3.1e-11 | 43.6 | 0.00014 | 1.0 | 9.2 |
| pfu_aug2.0_767.1_24388.t2 | 3 | 3 | Patatin | 262 | 281 | 3.1e-11 | 43.6 | 0.00018 | 1.3 | 8.8 |
Transcript
| Transcript ID | pfu_aug2.0_767.1_24388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_767.1_24388.t1 atggattccccgccggtacttgagaatttgatactgtcacttgtggctttatttacttggatttttgacactttttacag gatacggtacagggatattttctacacagtcaaaggtgctttaattcgaatgggaaattacatcacgggttatcaatggg tgcaaacctcacaggagaaagaacgactgaagatcgacgcagccagaaaccgatatatcgaggaaaggttcgcaaacgaa gatgatgtcatagcagagacgtcacaaactaccggaagtcccaaagatgaagtagacggaggactgaccaatggaaaagg tgagttatttcagccaatcagaattaagattattcacgatcatctagccaggctccgagcggctgtgaaaatgagagaca ctttttgcacatactacgatatagttttagtagagaccaaaactcatcgtagcatccagcgttctattgtgttggaggag caaggactgtacgatcagattaagcgttacgctggttccagcgccggcgccatgacggcagcgcttctcgctgtgggata tgactcgtttgagatccaggattttttatcccaggatttatctcatttctttctaggaatgtttcaagcaacaaactata cagtgaatggagagacgaatacttatgtggatggcggagtgatatgtaactacccaatccactgctatgacggaatgttt caagcaacaaactatacagtgaatggagagacgaatacttatgtggatggcggagtgatatgtaactacccaatccactg ctatgacgataccaaatctgttgttctagctacaacatggacaaaggcgaaattagaacagaagaaaatccaagagaagg cgaaacgtgaacaccggcgcgtgactcttgccgtagatcagttcttaaaggttctgaagaagcacaatctggacaaagat gaccacatcaacagagaggagttagagaacgcatttgatgacgaagacgacatggatcgtactgttggaattaataccgg atatgtgggaacttccgacttcaaattagagaaagaggacatggcgttcgttgttgaccaagggtacagatccacaaagt ctttcctgaaatattacgccgcaaaggaagaaatagagagggaacttgaacgagcgaataaagacatctccactaaacgc agcttgtcgtttaaagagtccatagacgaagcaggggaggaagacctggtggacgccattttgaaatcagaaaaaatgaa atcggaaacggaagctgtgttctatgacgacgttgatggtgcatcaggtgataataataataaagaaaaggtgccattga tatctgacacaaatagatga |
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| Transcript ID | pfu_aug2.0_767.1_24388.t2 |
| Definition | - |
>pfu_aug2.0_767.1_24388.t2 atggattccccgccggtacttgagaatttgatactgtcacttgtggctttatttacttggatttttgacactttttacag gatacggtacagggatattttctacacagtcaaaggtgctttaattcgaatgggaaattacatcacgggttatcaatggg tgcaaacctcacaggagaaagaacgactgaagatcgacgcagccagaaaccgatatatcgaggaaaggttcgcaaacgaa gatgatgtcatagcagagacgtcacaaactaccggaagtcccaaagatgaagtagacggaggactgaccaatggaaaagt tgtgagaaggtttggttttagcaccattatatacagtaacatcactgctctacagtattatgtatttatgcgatcatcta gccaggctccgagcggctgtgaaaatgagaggtatgcggatttaacaacttcattgaaatatttggtgtatttcatattt tttacaaaaaatccttgggaattaaaattaactgtgttggaggagcaaggactgtacgatcagattaagcgttacgctgg ttccagcgccggcgccatgacggcagcgcttctcgctgtgggatatgactcgtttgagatccaggattttttatcccagg atttatctcatttctttctaggaatgtttcaagcaacaaactatacagtgaatggagagacgaatacttatgtggatggc ggagtgatatgtaactacccaatccactgctatgacggaatgtttcaagcaacaaactatacagtgaatggagagacgaa tacttatgtggatggcggagtgatatgtaactacccaatccactgctatgacgataccaaatctgttgttctagctacaa catggacaaaggcgaaattagaacagaagaaaatccaagagaaggcgaaacgtgaacaccggcgcgtgactcttgccgta gatcagttcttaaaggttctgaagaagcacaatctggacaaagatgaccacatcaacagagaggagttagagaacgcatt tgatgacgaagacgacatggatcgtactgttggaattaataccggatatgtgggaacttccgacttcaaattagagaaag aggacatggcgttcgttgttgaccaagggtacagatccacaaagtctttcctgaaatattacgccgcaaaggaagaaata gagagggaacttgaacgagcgaataaagacatctccactaaacgcagcttgtcgtttaaagagtccatagacgaagcagg ggaggaagacctggtggacgccattttgaaatcagaaaaaatgaaatcggaaacggaagctgtgttctatgacgacgttg atggtgcatcaggtgataataataataaagaaaaggtgccattgatatctgacacaaatagatga |
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Protein
| Protein ID | pfu_aug2.0_767.1_24388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_767.1_24388.t1 MDSPPVLENLILSLVALFTWIFDTFYRIRYRDIFYTVKGALIRMGNYITGYQWVQTSQEKERLKIDAARNRYIEERFANE DDVIAETSQTTGSPKDEVDGGLTNGKGELFQPIRIKIIHDHLARLRAAVKMRDTFCTYYDIVLVETKTHRSIQRSIVLEE QGLYDQIKRYAGSSAGAMTAALLAVGYDSFEIQDFLSQDLSHFFLGMFQATNYTVNGETNTYVDGGVICNYPIHCYDGMF QATNYTVNGETNTYVDGGVICNYPIHCYDDTKSVVLATTWTKAKLEQKKIQEKAKREHRRVTLAVDQFLKVLKKHNLDKD DHINREELENAFDDEDDMDRTVGINTGYVGTSDFKLEKEDMAFVVDQGYRSTKSFLKYYAAKEEIERELERANKDISTKR SLSFKESIDEAGEEDLVDAILKSEKMKSETEAVFYDDVDGASGDNNNKEKVPLISDTNR |
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| Protein ID | pfu_aug2.0_767.1_24388.t2 |
| Definition | - |
>pfu_aug2.0_767.1_24388.t2 MDSPPVLENLILSLVALFTWIFDTFYRIRYRDIFYTVKGALIRMGNYITGYQWVQTSQEKERLKIDAARNRYIEERFANE DDVIAETSQTTGSPKDEVDGGLTNGKVVRRFGFSTIIYSNITALQYYVFMRSSSQAPSGCENERYADLTTSLKYLVYFIF FTKNPWELKLTVLEEQGLYDQIKRYAGSSAGAMTAALLAVGYDSFEIQDFLSQDLSHFFLGMFQATNYTVNGETNTYVDG GVICNYPIHCYDGMFQATNYTVNGETNTYVDGGVICNYPIHCYDDTKSVVLATTWTKAKLEQKKIQEKAKREHRRVTLAV DQFLKVLKKHNLDKDDHINREELENAFDDEDDMDRTVGINTGYVGTSDFKLEKEDMAFVVDQGYRSTKSFLKYYAAKEEI ERELERANKDISTKRSLSFKESIDEAGEEDLVDAILKSEKMKSETEAVFYDDVDGASGDNNNKEKVPLISDTNR |
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