Gene
| Gene Model ID | pfu_aug2.0_767.1_24389 |
|---|---|
| Locus | scaffold767.1 : 206414 ... 217384 : - |
| To GenomeBrowser | scaffold767.1:206414..217384 |
| Genes list of scaffold | scaffold767.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_767.1_24389.t1 | 2 | 1 | z-alpha | 5 | 41 | 2.6e-06 | 27.0 | 0.12 | 200.0 | 1.8 |
| pfu_aug2.0_767.1_24389.t1 | 2 | 1 | HTH_5 | 10 | 42 | 5.6e-06 | 25.9 | 1.3e-08 | 2.1e-05 | 24.0 |
| pfu_aug2.0_767.1_24389.t1 | 2 | 2 | z-alpha | 207 | 250 | 2.6e-06 | 27.0 | 4.3e-08 | 7.1e-05 | 22.4 |
| pfu_aug2.0_767.1_24389.t1 | 2 | 2 | HTH_5 | 235 | 244 | 5.6e-06 | 25.9 | 0.79 | 1300.0 | -0.9 |
Transcript
| Transcript ID | pfu_aug2.0_767.1_24389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_767.1_24389.t1 atgatatacgaacaaatctcaaccaaaaagtcagccacagtttcaaaattagcaagccatcttaagatatctgtacctaa tactgagcattgcctaggtgtactgagggaacagggacttgttactaatatagggaatatatggtgtcttccaggaactg aaggtgataatacactactagaagattcacaaccattctcagaggccgagggggcgttatgttcacgtttagaacagagc agtatatcggatgacacaaggttaaaatcattggaggataacaagacagaggaaacacttacaaagtcatatctagatga cttagggagtactcatgctacacatagtaaagttcctgtacaaccaacactcagacagtctcaaatctcaagtacagagg gagaagacaccattgtgaagtccattgataatggaaggcgctctcacagtggttcacggtcaaatttacaaagggagcag atctccccaggaggatcacaaaaaaccatacgtgccgggccatacaatctcactaccagtgctccagtacaggctgctta ctcagaatcaccagatcctagcttacaaccaaactatgagaaaatactaagaattattgatttctttaaaactggtgaat ctggtataaagccccatgaggttgctcggcagactggactcggatcgttgaaaaaggatgtcaataaaattctgtactcc ctggagaagaaaaaaatattacagaggaaatgtaacgagaacaaaggaaatccattatggagtgctggagaaaaaattaa tacgtgttcacatgacatgattttggagtgtgcggccgaggtttccaaaggtttacctacacagaaatctgctgtcgaga acccaggagatgtacatgtccaccaccaccatcatcatcaacacaacacgtatttacaggtcggacaagataacaaactc cttcctccacaagatccagccccttgtagaaacccaagatcactacccccacaggctggaaggagatcttga |
|
Protein
| Protein ID | pfu_aug2.0_767.1_24389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_767.1_24389.t1 MIYEQISTKKSATVSKLASHLKISVPNTEHCLGVLREQGLVTNIGNIWCLPGTEGDNTLLEDSQPFSEAEGALCSRLEQS SISDDTRLKSLEDNKTEETLTKSYLDDLGSTHATHSKVPVQPTLRQSQISSTEGEDTIVKSIDNGRRSHSGSRSNLQREQ ISPGGSQKTIRAGPYNLTTSAPVQAAYSESPDPSLQPNYEKILRIIDFFKTGESGIKPHEVARQTGLGSLKKDVNKILYS LEKKKILQRKCNENKGNPLWSAGEKINTCSHDMILECAAEVSKGLPTQKSAVENPGDVHVHHHHHHQHNTYLQVGQDNKL LPPQDPAPCRNPRSLPPQAGRRS |
|