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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_7674.1_16281
Locus scaffold7674.1 : 2066 ... 6508 : +
To GenomeBrowser scaffold7674.1:2066..6508
Genes list of scaffold scaffold7674.1
Synonym pfu_aug1.0_8724.1_67919

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_7674.1_16281.t1 1 1 Herpes_alk_exo 297 458 6.7e-13 47.9 3.3e-16 1.2e-12 47.0
pfu_aug2.0_7674.1_16281.t1 1 1 YqaJ 362 515 1.7e-20 73.5 7.9e-24 2.9e-20 72.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_7674.1_16281.t1 gi|585683519|ref|XP_002731504.2| PREDICTED: uncharacterized protein LOC100377660 [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDpfu_aug2.0_7674.1_16281.t1
Definition-
>pfu_aug2.0_7674.1_16281.t1
atggccgaaagcgagttcagcttgttgaaattgcccgatctacagacttttctggctaaacgaggaattacaacaaacaa
tataaggaaagataagcttgttgaattgtgtgaagcggtaaatcatctgaacttgcctttagaccctgattttaccactc
aatgtccatccattgatctaaaggaaaagttgcgtcatctacctttacctgatccctttgtggaggaaggcttcactgac
gattttagtgatatcccgaataatttcacgttattagatatattcaattaccttctatacagaacatcagactatgacaa
gaagaagctgaaagcgtataaatcttgcgaggattatcgtttatttgttgatggacatgttgaaagtctcttatttaaca
gttgtggagattctgagctatgtgttttccgtgcgaaagtaaagcccacacagagggacaagacttacttgaatacaaag
ttctatcacttgtggttctgtattaaaaaagcaacaggagaggtcatgtcagcatattgcaattgtataggcgggatgga
cggtgcttgcagacatgtatcagcagctctctatgaattggacaattttgaagtaaaatcggtcacagatggagaaaata
aatggatgaaaaggccaagaagtcatgactgtcctgtccctatcaaaagtttgaggattgtcaaagcaagatattcatca
ttaaatgaagacaaagagaataatctagaggtttacgatcctaggtttgtagacgacagaaacagtatggacatcagcga
tttcaccaaacagctacagcagttgcatccagatacacaggccatggacatattagatgcagacatcaaaccttcagaaa
ctgagagaaatgagacaccacagtctttaccttactcaatcaaggagcaggttaaggagttcttggtccaggaaaaacca
gcatctagtagcatacatgtagttcagaatgtggattcatttagagagcatcttggacagttttcccaagacatcgtaaa
caccattgaaaaggacactagaggtcaatttcaaaactcaacttggaaaaccatgaggtatggaatgcttaccgcatcca
atttccataaaatttgtaatgcggttgataggcgtcactgtcccccatcgttacttaactctattctgtccaaatacgag
acagatcttgaagttccatcgctgcagtggggaaggaaaaaggaacccgtagcccgtgacctatatacacgagctagcag
aatcaatcacaagaaggctatggtggaggagaaaggactctatgttatgaatgactgcccttttataggttgcagtgtgg
atggtatcttttcctgcaagtgtcatggaatgaaaattcttgaaataaagtgtccatattctacaagaaatctgcatccg
aaggaagttgccatacaaaagggttgctgtattgatgggaataagtctgttgtgacggaaaactgtgattactaccacca
gctacaaggacaaatgggcctctatggtataccatcatgtgatctggtaatttacactcagaaaggaatacatgtgtctc
atcttgagtttaataaaatctttttcaatgaaatgatgaagaaattgcaattattttttgatcagtatctatttcaacgt
ttattgacagatgttaacaatgataaataa

Protein
Protein IDpfu_aug2.0_7674.1_16281.t1
Definition-
>pfu_aug2.0_7674.1_16281.t1
MAESEFSLLKLPDLQTFLAKRGITTNNIRKDKLVELCEAVNHLNLPLDPDFTTQCPSIDLKEKLRHLPLPDPFVEEGFTD
DFSDIPNNFTLLDIFNYLLYRTSDYDKKKLKAYKSCEDYRLFVDGHVESLLFNSCGDSELCVFRAKVKPTQRDKTYLNTK
FYHLWFCIKKATGEVMSAYCNCIGGMDGACRHVSAALYELDNFEVKSVTDGENKWMKRPRSHDCPVPIKSLRIVKARYSS
LNEDKENNLEVYDPRFVDDRNSMDISDFTKQLQQLHPDTQAMDILDADIKPSETERNETPQSLPYSIKEQVKEFLVQEKP
ASSSIHVVQNVDSFREHLGQFSQDIVNTIEKDTRGQFQNSTWKTMRYGMLTASNFHKICNAVDRRHCPPSLLNSILSKYE
TDLEVPSLQWGRKKEPVARDLYTRASRINHKKAMVEEKGLYVMNDCPFIGCSVDGIFSCKCHGMKILEIKCPYSTRNLHP
KEVAIQKGCCIDGNKSVVTENCDYYHQLQGQMGLYGIPSCDLVIYTQKGIHVSHLEFNKIFFNEMMKKLQLFFDQYLFQR
LLTDVNNDK

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