Gene
| Gene Model ID | pfu_aug2.0_77.1_23381 |
|---|---|
| Locus | scaffold77.1 : 87226 ... 92880 : + |
| To GenomeBrowser | scaffold77.1:87226..92880 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_82824.1_27814 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| apoptosis-resistant e3 ubiquitin protein ligase 1 isoform x2 | GO:0004842 GO:0016567 GO:0016874 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23381.t1 | 1 | 1 | HECT | 47 | 167 | 1.2e-13 | 50.9 | 8.8e-18 | 1.3e-13 | 50.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23381.t1 | gi|676458983|ref|XP_009055153.1| | hypothetical protein LOTGIDRAFT_215855 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_77.1_23381.t1 | gi|242000578|ref|XP_002434932.1| | ubiquitin protein ligase, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_77.1_23381.t1 | gi|751239268|ref|XP_011173613.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_77.1_23381.t1 | gi|752876275|ref|XP_011255526.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_77.1_23381.t1 | gi|751239274|ref|XP_011173617.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X2 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23381.t1 atgcctccggtggcatctttgttatcatatagatgtacaaagagttttagtgaatcagactggtacaagaatttccagtt acattttattggagaacacggtttggattggggaggtgtgcggagggaatggtttgaggtcgtttgtacagaattatttg acccaagtagatctccactatttgtcaggttcagtaaagaaaattctcaaggtttggttcacccgaatcctttacgcagt acagaattcaaattaaggtattatgagtttgctgggaagattgtgggcaagtgtttatatgactcggctcgtggtagtgc ttatagacaactggtcaaggccaaactctcaaggtcattcctggctcaactcataggactgcaagttaactataggtatt ttgagacagatgaccctgacctttataagacaaaggtcagatatatccttgacaacaacattgatgacatggagctgacc ttttctgaggaggaatatactcctgacggccagttactcagggtatgtaactcttaa |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23381.t1 MPPVASLLSYRCTKSFSESDWYKNFQLHFIGEHGLDWGGVRREWFEVVCTELFDPSRSPLFVRFSKENSQGLVHPNPLRS TEFKLRYYEFAGKIVGKCLYDSARGSAYRQLVKAKLSRSFLAQLIGLQVNYRYFETDDPDLYKTKVRYILDNNIDDMELT FSEEEYTPDGQLLRVCNS |
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