Gene
| Gene Model ID | pfu_aug2.0_77.1_23382 |
|---|---|
| Locus | scaffold77.1 : 102556 ... 112236 : + |
| To GenomeBrowser | scaffold77.1:102556..112236 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_13785.1_68679 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-8a | GO:0003924 GO:0005525 GO:0005654 GO:0005730 GO:0005813 GO:0005886 GO:0006886 GO:0006904 GO:0007409 GO:0008021 GO:0008152 GO:0009306 GO:0014069 GO:0016079 GO:0017157 GO:0019003 GO:0019901 GO:0030140 GO:0030425 GO:0030667 GO:0030670 GO:0031489 GO:0031513 GO:0032482 GO:0032869 GO:0036064 GO:0042384 GO:0042593 GO:0043025 GO:0046326 GO:0048169 GO:0048210 GO:0051223 GO:0055038 GO:0070062 GO:0072659 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23382.t1 | 1 | 1 | Ras | 1 | 86 | 2.6e-29 | 101.6 | 8.4e-33 | 3.1e-29 | 101.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23382.t1 | gi|156383922|ref|XP_001633081.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_77.1_23382.t1 | gi|184186107|ref|NP_001116975.1| | GTPase homolog [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_77.1_23382.t1 | gi|655888218|ref|XP_008247544.1| | PREDICTED: ras-related protein Rab-8A [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_77.1_23382.t1 | gi|676469246|ref|XP_009058470.1| | hypothetical protein LOTGIDRAFT_204153 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_77.1_23382.t1 | gi|348556994|ref|XP_003464305.1| | PREDICTED: ras-related protein Rab-8A [Cavia porcellus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23382.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23382.t1 atgcttgtgtatgatatcacaaatgaaaaatcctttgagaacatcagaaattggatacggaatatagaggagcatgcctc acaagatgtagagaagatgatcctaggcaataaatgtgacatgaacgataagagggtcgtgtcaaaggaaaaaggagaaa gtcttgcaatagaacatggtattaagtttatggagactagtgctaaggctagcatcaatgttgaagaagcatttttcaca ctggccagagatatcaaggcaaagatggataaaaaacttgaaaattcaaatgtacaaagtaaaggtagtggtggacagca attgacaaataaacctccagccaaaaaatcaggttggaggtgtacaatcctgtga |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23382.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23382.t1 MLVYDITNEKSFENIRNWIRNIEEHASQDVEKMILGNKCDMNDKRVVSKEKGESLAIEHGIKFMETSAKASINVEEAFFT LARDIKAKMDKKLENSNVQSKGSGGQQLTNKPPAKKSGWRCTIL |
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