Gene
| Gene Model ID | pfu_aug2.0_77.1_23384 |
|---|---|
| Locus | scaffold77.1 : 117725 ... 120375 : - |
| To GenomeBrowser | scaffold77.1:117725..120375 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-21-like | GO:0005525 GO:0007264 GO:0015031 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23384.t1 | 1 | 1 | Ras | 1 | 55 | 5.3e-14 | 51.9 | 4.3e-18 | 6.4e-14 | 51.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23384.t1 | gi|524910859|ref|XP_005110303.1| | PREDICTED: ras-related protein Rab-21-like [Aplysia californica] | 4.0e-22 |
| pfu_aug2.0_77.1_23384.t1 | gi|637340512|ref|XP_008116395.1| | PREDICTED: ras-related protein Rab-31 isoform X2 [Anolis carolinensis] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23384.t1 atgtgtttgattggtaataaatgtgacctgtctgacaacagagaagtgtccgttaaggaagcccaggaatatgccgagtc tataggagctctattccacgagacatcagctctaaaaaatatagggattgaggaagcgtttttagaagttgctcagcagt tgatcaagttatacgagacatctcccaactcaggactacacaccatagatatgggagagaatcgatctggggcccaagac aggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaactctagtattaaacttcctgaag aggaatcctcaaagcctgccacacaacaggacactaagtgtgcttgttag |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23384.t1 MCLIGNKCDLSDNREVSVKEAQEYAESIGALFHETSALKNIGIEEAFLEVAQQLIKLYETSPNSGLHTIDMGENRSGAQD RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSIKLPEEESSKPATQQDTKCAC |
|