Gene
| Gene Model ID | pfu_aug2.0_77.1_23385 |
|---|---|
| Locus | scaffold77.1 : 133813 ... 147635 : - |
| To GenomeBrowser | scaffold77.1:133813..147635 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_6897.1_67587 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23385.t1 | 1 | 1 | zf-tcix | 13 | 54 | 1.7e-21 | 75.2 | 2.6e-25 | 3.9e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23385.t1 | gi|676469269|ref|XP_009058477.1| | hypothetical protein LOTGIDRAFT_122741 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_77.1_23385.t1 | gi|667281369|ref|XP_008574402.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X3 [Galeopterus variegatus] | 0.0 |
| pfu_aug2.0_77.1_23385.t1 | gi|632985611|ref|XP_007909779.1| | PREDICTED: uncharacterized protein C2orf42 homolog, partial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_77.1_23385.t1 | gi|675796257|ref|XP_008954612.1| | PREDICTED: uncharacterized protein C2orf42 homolog [Pan paniscus] | 0.0 |
| pfu_aug2.0_77.1_23385.t1 | gi|593736223|ref|XP_007113514.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X3 [Physeter catodon] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23385.t1 atgacaacacctgataaactgaagactctgtttgaagatcttggtaaaccaaccttgcgtggagtaagaaaatgtccaaa atgtggcacatataatgggacacgaggaattagttgtaaaaacaaggcttgtgacgtggtttttaaagagcgtgaaaaga agaaaggccatagtgctgatgctgtgaagatcataactggctctgcagttcaggttttttcagtacgcctacgtgacaga ggtcctgattataggggctttgttcagcttccgttagttcaggatttagatggtaaccctgcaccagttgttgaccctgc cattctgtctcaagctgctaggtgttatgtagatagttgtagcagaaataatcaactagggattcaggaggaggcgtgtc ttcatatcaggtctgccatagaatgtgagcaggaagcacaacctcttacactcaaaaattctgtgctcaattcattacag gtgtcaaatgacatgaagcaagcaatatggttgttagcaacagaaacctccgggccattagtgcaacgagtaaccaaaaa cataatggttgttaagtgtaaaccaagtcctaaacagccattgggatttcttcatttctctttctttgaaactacaagga acagagctcaaccagagcgcaagtttcagtgtacttgtagggcattcaagaataaacctggatccaaggatgagatttac aagagatgtgttcatttctacgcttgtgtgtgtgccttttctagtgacgagaaactgacggaagaatttgatttttatat aaacctggatatgaatgttcctatagtacaagagccaccttccccagagagacagattgtgaccatatatcaagatggaa accttgacccgtcagaccagacaacccttgaggtggtagttacagacagtatcctaggacctcctgctaaaaaacacaaa aaagacgatacactaggcaatccagatcccctagttttccatgcacctcagatgttctttgactgtttacaacaacgaat ttctgcgggaagtaagaagaaacgtctccctaactttaccactggattcctgaggaaagatgctttaccactgggaactt ttaccaaatatacatggcatatatcaagtatattacatgtaaagcagatatttgatacaccagagatgtcactggacatt accaggaactttgtagagaacagagatggtacatatgacctttatgaaatccccagagtagaagtagagaatgtagagga atccctgaaaggaaagaatcccatgccaattagaccctttgaacttaaaacctacctcaaagttggaaccacatcttcag atcagaaagaacctaccccatttatcattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaatggatacctgatatactgccaaaatctcgtatag |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23385.t1 MTTPDKLKTLFEDLGKPTLRGVRKCPKCGTYNGTRGISCKNKACDVVFKEREKKKGHSADAVKIITGSAVQVFSVRLRDR GPDYRGFVQLPLVQDLDGNPAPVVDPAILSQAARCYVDSCSRNNQLGIQEEACLHIRSAIECEQEAQPLTLKNSVLNSLQ VSNDMKQAIWLLATETSGPLVQRVTKNIMVVKCKPSPKQPLGFLHFSFFETTRNRAQPERKFQCTCRAFKNKPGSKDEIY KRCVHFYACVCAFSSDEKLTEEFDFYINLDMNVPIVQEPPSPERQIVTIYQDGNLDPSDQTTLEVVVTDSILGPPAKKHK KDDTLGNPDPLVFHAPQMFFDCLQQRISAGSKKKRLPNFTTGFLRKDALPLGTFTKYTWHISSILHVKQIFDTPEMSLDI TRNFVENRDGTYDLYEIPRVEVENVEESLKGKNPMPIRPFELKTYLKVGTTSSDQKEPTPFIIXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGYLIYCQNLV |
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