Gene
| Gene Model ID | pfu_aug2.0_77.1_23387 |
|---|---|
| Locus | scaffold77.1 : 164966 ... 188957 : + |
| To GenomeBrowser | scaffold77.1:164966..188957 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_1262.1_29643 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| actin-binding lim protein 3-like isoform x1 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23387.t2 | 1 | 1 | VHP | 541 | 576 | 4.3e-15 | 55.1 | 5.2e-19 | 7.7e-15 | 54.2 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23387.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23387.t1 atgggtcagaagtctaccaaacacaagaaggattcagatggtgaaccggatcctacacccagaaaatcaccaaaaaggtc aggtcaaaggtcatcagcatcaggtcagaggtcaccaagctcagaaggacacgacagaccaatctcgccaagtcgacacg atggtgaagagagacaagtgatctcggagagtagagtagaagcgaggagtcacagtgcactgtcaacatctccaaaacat acagacgaacctatggactatgatcaaaaagagaatataggcgatatgtctgtacgtatgtccggtactaagacaccgac caaagtcagtggcaaagacagcgataaggagccgttcacaccaaggtcaatcaaccagctgaacgcccctcaggccacgt ctacacccgctcctaacggtatcatcagcacgggacatgctctcagtgtcagtgtagattcggaccaggaccagactgat cagagtgatgacgaggccttcactccctcagaccaacagttagcaaacacaagcagaagtcctagtactatatctataaa ctcccagtcaacgctcggcagctttagaaagacgccctctcattcggattcctacgacagaaacccagcagtggattatg ggaagttttacaataccagttacttggtgggggcaaagagtacttaccttcagaaagcctctgtcaaacccatcaagaaa gtacacagctcgccacactttcatagacctgttaatttttcctacagtagagagcctccagaattcttaaagtcaaaaaa gactggtatggcagcattagctactggtaccaaggtaatagtgaggagaactcgtcgcgcatcttccccatcagatctga agaatgaagaagcgatcagaatgagcatgtttcccggaggaaagccgcccaaaccaaacgagataacaaagatagagcaa gaagattggcctggtccaccatcactagccgctatattaccagaaataatacgagcaaggaggaaaagtaaaggagaaga agatgatgatgatgatgaagacatgacgcccacacaggatgagcacttgatcaaagaaatccaggaaatctctaagttca aggataaatctggtataggaaaaatcatctacaaagagctggaagcaaagaaagcccagcctcccaaacccttaaatcca tggaaggcttcacgcgtacccagtgccaaatttgagcccagatacagcacacgttatcaatctcccatgtttgcttctcc atcacgatttctggacagaccaagaagatcctgggatgatagtgacatacaaagaggttatagaactatgtcaactatgg ccaactatccagtaccacgtccaggttatggttcctatggcctcactcctcgggccgctacgttacctttgtcgggattg tttggaggtcctctcacttataggttctatgatttcgatgaaacagacatagcacatagaccatcatatacatccacatc aacaatgaacacagagcacgagtcccatactacatcgagtattctggggggccaggggatgtcaatattgtcactacaga ggagtacctggcacacagaggctgagcctcaggtttatccatatgatcgtctgaaaattaccaatttcgatttaccaaag gatgtagacaggaatatgttggagatacatttatcaccagaagaatttagtgatatcttcaaaatgggaaaagaggaatt ctacaagatagctgaatggaggaggaatgacataaaaaggaaagcagatctcttctga |
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| Transcript ID | pfu_aug2.0_77.1_23387.t2 |
| Definition | - |
>pfu_aug2.0_77.1_23387.t2 atgggtcagaagtctaccaaacacaagaaggattcagatggtgaaccggatcctacacccagaaaatcaccaaaaaggtc aggtcaaaggtcatcagcatcaggtcagaggtcaccaagctcagaaggacacgacagaccaatctcgccaagtcgacacg atggtgaagagagacaagtgatctcggagagtagagtagaagcgaggagtcacagtgcactgtcaacatctccaaaacat acagacgaacctatggactatgatcaaaaagagaatataggcgatatgtctgtacgtatgtccggtactaagacaccgac caaagtcagtggcaaagacagcgataaggagccgttcacaccaaggtcaatcaaccagctgaacgcccctcaggccacgt ctacacccgctcctaacggtatcatcagcacgggacatgctctcagtgtcagtgtagattcggaccaggaccagactgat cagagtgatgacgaggccttcactccctcagaccaacaggattcctacgacagaaacccagcagtggattatgggaagtt ttacaataccagttacttggtgggggcaaagagtacttaccttcagaaagcctctgtcaaacccatcaagaaagtacaca gctcgccacactttcatagacctgttaatttttcctacagtagagagcctccagaattcttaaagtcaaaaaagactggt atggcagcattagctactggtaccaaggtaatagtgaggagaactcgtcgcgcatcttccccatcagatctgaagaatga agaagcgatcagaatgagcatgtttcccggaggaaagccgcccaaaccaaacgagataacaaagatagagcaagaagatt ggcctggtccaccatcactagccgctatattaccagaaataatacgagcaaggaggaaaagtaaaggagaagaagatgat gatgatgatgaagacatgacgcccacacaggatgagcacttgatcaaagaaatccaggaaatctctaagttcaaggataa atctggtataggaaaaatcatctacaaagagctggaagcaaagaaagcccagcctcccaaacccttaaatccatggaagg cttcacgcgtacccagtgccaaatttgagcccagatacagcacacgttatcaatctcccatgtttgcttctccatcacga tttctggacagaccaagaagatcctgggatgatagtgacatacaaagaggttatagaactatgtcaactatggccaacta tccagtaccacgtccaggttatggttcctatggcctcactcctcgggccgctacgttacctttgtcgggattgtttggag gtcctctcacttataggttctatgatttcgatgaaacagacatagcacatagaccatcatatacatccacatcaacaatg aacacagagcacgagtcccatactacatcgagtattctggggggccaggggatgtcaatattgtcactacagaggagtac ctggcacacagaggctgagcctcaggtttatccatatgatcgtctgaaaattaccaatttcgatttaccaaaggatgtag acaggaatatgttggagatacatttatcaccagaagaatttagtgatatcttcaaaatgggaaaagaggaattctacaag atagctgaatggaggaggaatgacataaaaaggaaagcagatctcttctga |
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Protein
| Protein ID | pfu_aug2.0_77.1_23387.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23387.t1 MGQKSTKHKKDSDGEPDPTPRKSPKRSGQRSSASGQRSPSSEGHDRPISPSRHDGEERQVISESRVEARSHSALSTSPKH TDEPMDYDQKENIGDMSVRMSGTKTPTKVSGKDSDKEPFTPRSINQLNAPQATSTPAPNGIISTGHALSVSVDSDQDQTD QSDDEAFTPSDQQLANTSRSPSTISINSQSTLGSFRKTPSHSDSYDRNPAVDYGKFYNTSYLVGAKSTYLQKASVKPIKK VHSSPHFHRPVNFSYSREPPEFLKSKKTGMAALATGTKVIVRRTRRASSPSDLKNEEAIRMSMFPGGKPPKPNEITKIEQ EDWPGPPSLAAILPEIIRARRKSKGEEDDDDDEDMTPTQDEHLIKEIQEISKFKDKSGIGKIIYKELEAKKAQPPKPLNP WKASRVPSAKFEPRYSTRYQSPMFASPSRFLDRPRRSWDDSDIQRGYRTMSTMANYPVPRPGYGSYGLTPRAATLPLSGL FGGPLTYRFYDFDETDIAHRPSYTSTSTMNTEHESHTTSSILGGQGMSILSLQRSTWHTEAEPQVYPYDRLKITNFDLPK DVDRNMLEIHLSPEEFSDIFKMGKEEFYKIAEWRRNDIKRKADLF |
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| Protein ID | pfu_aug2.0_77.1_23387.t2 |
| Definition | - |
>pfu_aug2.0_77.1_23387.t2 MGQKSTKHKKDSDGEPDPTPRKSPKRSGQRSSASGQRSPSSEGHDRPISPSRHDGEERQVISESRVEARSHSALSTSPKH TDEPMDYDQKENIGDMSVRMSGTKTPTKVSGKDSDKEPFTPRSINQLNAPQATSTPAPNGIISTGHALSVSVDSDQDQTD QSDDEAFTPSDQQDSYDRNPAVDYGKFYNTSYLVGAKSTYLQKASVKPIKKVHSSPHFHRPVNFSYSREPPEFLKSKKTG MAALATGTKVIVRRTRRASSPSDLKNEEAIRMSMFPGGKPPKPNEITKIEQEDWPGPPSLAAILPEIIRARRKSKGEEDD DDDEDMTPTQDEHLIKEIQEISKFKDKSGIGKIIYKELEAKKAQPPKPLNPWKASRVPSAKFEPRYSTRYQSPMFASPSR FLDRPRRSWDDSDIQRGYRTMSTMANYPVPRPGYGSYGLTPRAATLPLSGLFGGPLTYRFYDFDETDIAHRPSYTSTSTM NTEHESHTTSSILGGQGMSILSLQRSTWHTEAEPQVYPYDRLKITNFDLPKDVDRNMLEIHLSPEEFSDIFKMGKEEFYK IAEWRRNDIKRKADLF |
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