Gene
Gene Model ID | pfu_aug2.0_77.1_23390 |
---|---|
Locus | scaffold77.1 : 206773 ... 256349 : + |
To GenomeBrowser | scaffold77.1:206773..256349 |
Genes list of scaffold | scaffold77.1 |
Synonym | pfu_aug1.0_2004.1_29939 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
ubiquitin-conjugating enzyme e2-17 kda | GO:0000209 GO:0002119 GO:0005524 GO:0005875 GO:0006915 GO:0007067 GO:0007140 GO:0007286 GO:0008054 GO:0009792 GO:0016322 GO:0016477 GO:0016881 GO:0030718 GO:0031625 GO:0031647 GO:0040035 GO:0042787 GO:0045676 GO:0048132 GO:0051276 GO:0061630 GO:0061631 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_77.1_23390.t1 | 2 | 1 | UQ_con | 5 | 141 | 0.0 | 344.1 | 0.0 | 0.0 | 170.9 |
pfu_aug2.0_77.1_23390.t1 | 2 | 1 | Prok-E2_B | 46 | 117 | 1.9e-09 | 37.3 | 7.3e-07 | 0.0018 | 18.0 |
pfu_aug2.0_77.1_23390.t1 | 2 | 1 | RWD | 50 | 97 | 5.9e-08 | 32.6 | 9.6e-06 | 0.024 | 14.5 |
pfu_aug2.0_77.1_23390.t1 | 2 | 2 | UQ_con | 174 | 306 | 0.0 | 344.1 | 0.0 | 0.0 | 171.4 |
pfu_aug2.0_77.1_23390.t1 | 2 | 2 | Prok-E2_B | 215 | 282 | 1.9e-09 | 37.3 | 1.2e-06 | 0.003 | 17.3 |
pfu_aug2.0_77.1_23390.t1 | 2 | 2 | RWD | 218 | 279 | 5.9e-08 | 32.6 | 1.5e-06 | 0.0036 | 17.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_77.1_23390.t1 | gi|24646906|ref|NP_731941.1| | effete, isoform A [Drosophila melanogaster] | 0.0 |
pfu_aug2.0_77.1_23390.t1 | gi|383856822|ref|XP_003703906.1| | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa isoform X2 [Megachile rotundata] | 0.0 |
pfu_aug2.0_77.1_23390.t1 | gi|665785772|ref|XP_008549001.1| | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Microplitis demolitor] | 0.0 |
pfu_aug2.0_77.1_23390.t1 | gi|156391789|ref|XP_001635732.1| | predicted protein [Nematostella vectensis] | 0.0 |
pfu_aug2.0_77.1_23390.t1 | gi|512919741|ref|XP_004929459.1| | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Bombyx mori] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_77.1_23390.t1 |
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Definition | - |
>pfu_aug2.0_77.1_23390.t1 atggcactaaagcgaataaataaggaactacaagacctgggcagagatcccccagcacagtgctctgcagggcctgtagg tgatgatttgttccactggcaagcaaccataatgggtccaccggacagtccctttcagggtggtgtatttttcctcacaa tacattttccaacagattaccctttcaagccacctaaggttgctttcacaacaagaatataccatcccaacataaacagt aacggcagtatttgtctggatattctacgttcacaatggtctccagctttaacgatttcaaaagttctcctttcaatatg ctccatgctgacagatccaaatccggatgatcctttggttccagaaattgcacgaatatacaaaactgataggtcaaaat acttagaacaggcgaaagaatggacaaagaagaattgttttcagccaatagtggaaactccaataggaaccaattgtgct ccacttcttgctgattaccaacaaattatggctctaaaaagaataaataaggaattacaagacttgggcagggacccacc agcacaatgctcagcagggccagtaggggacgatttatttcattggcaagcaacaataatgggtccacatgatagtccat atcagggtggtgtatttttcctctcaatacatttccctacggattaccctttcaagcctcccaagatagccttcacaaca agaatataccatcctaacataaacagtaacggcagtatttgtctggatattctacgttcacaatggtctccagctttaac gatttcaaaagttcttttatccatctgttccttgctgagtgatccaaatccagacgacccacttgtaccggagatcgctc gtgtttacaagacagatagacgaaaatacaatgaaactggagtagactggactaggaaatatgccatgtga |
Protein
Protein ID | pfu_aug2.0_77.1_23390.t1 |
---|---|
Definition | - |
>pfu_aug2.0_77.1_23390.t1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS NGSICLDILRSQWSPALTISKVLLSICSMLTDPNPDDPLVPEIARIYKTDRSKYLEQAKEWTKKNCFQPIVETPIGTNCA PLLADYQQIMALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPHDSPYQGGVFFLSIHFPTDYPFKPPKIAFTT RIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLSDPNPDDPLVPEIARVYKTDRRKYNETGVDWTRKYAM |