Gene
| Gene Model ID | pfu_aug2.0_77.1_23392 |
|---|---|
| Locus | scaffold77.1 : 292153 ... 315470 : + |
| To GenomeBrowser | scaffold77.1:292153..315470 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_8341.1_67845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23392.t1 | 2 | 1 | Ig_2 | 387 | 459 | 3.6e-10 | 39.8 | 0.0047 | 18.0 | 5.5 |
| pfu_aug2.0_77.1_23392.t1 | 2 | 1 | I-set | 388 | 450 | 8.1e-11 | 41.6 | 0.085 | 310.0 | 1.2 |
| pfu_aug2.0_77.1_23392.t1 | 2 | 1 | Ig_3 | 389 | 450 | 6.8e-07 | 29.7 | 0.00043 | 1.6 | 9.3 |
| pfu_aug2.0_77.1_23392.t1 | 2 | 2 | Ig_3 | 469 | 546 | 6.8e-07 | 29.7 | 1.3e-06 | 0.0048 | 17.3 |
| pfu_aug2.0_77.1_23392.t1 | 2 | 2 | Ig_2 | 473 | 549 | 3.6e-10 | 39.8 | 3.9e-11 | 1.4e-07 | 31.4 |
| pfu_aug2.0_77.1_23392.t1 | 2 | 2 | I-set | 484 | 558 | 8.1e-11 | 41.6 | 4.7e-13 | 1.8e-09 | 37.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23392.t1 | gi|242002284|ref|XP_002435785.1| | cell adhesion molecule, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_77.1_23392.t1 | gi|642917976|ref|XP_008198967.1| | PREDICTED: follistatin-related protein 5-like [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_77.1_23392.t1 | gi|752872947|ref|XP_011253737.1| | PREDICTED: follistatin-related protein 5-like [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23392.t1 atgatccctggccgctcaccattcatgtgtagtaaggccaccagcagcgtagccaaccttatagaatgtcatgacacatg tgtacgaggtcactgccaagccttcaggtttaaaaacgacggctccgaattctgtgagatattctttgacaaatcatgta tacctatgctggagaaaggcaaagataattactacgtcagaaggtgtgcaaatccggaggattgtaagtacgaggaggtg gagtccaaaggtggggcgccgtgtgagattgtgtccagtaatacagatacttttgagaaatgcagagagtcgtgtagttc gtgtgtagccttcaaatatctgtacgacagtggagagtgcagcttatttcagcagacttcctgtatcaccaagaaaaata tcaattatatcaagagggactgccatagacctgaaatagaagctggaacaacaactgacgtaaaccatgttattgccatg gcaccaacacaagaccatctcagtgtaaagaaagaactcaaggacaatgttgagaaccaagatgacaccatcgttaaagg tgaccaaaacaaacaaacaacagtcatcatcccaactgcggagccgaaatctgatcagcaggtgcaacggaattctggtt tggaccatttggaggtcgtggaaggaggtgccaaaacaatgcaggatccagatgccaaagaggtgaaaaaagacggcagg acgggagtgtcagatgtcaaagtcgatcaagatcccgatactttgtatggagaaagcggtgaaaaggatgacgattctat gtacgagaaaatctgcaccctacaggagtataacaggatgaaaggagatatattgaggtaccattgtgtgaagcttggag aagcacactgtggagatactcaaatacctaaaaagtcatatatagccacattgatgttcagcttttatgatcgtaacatg gatgaatccatacagaaagatgaattatgggaaatatggctgatggaaaacttcgacaaaatgttttcatcttgcacgct tttggatttgttcaaatttgaaaacataaaggatgacgcaatatacaaagatgatttcttggatatttttgatataccag aagctgccatgcaggaggagatccaagtcataaccactctggccactgtgggtaacgggctggagatcaggtgtgggcta cagccatcatcagacgtatcacagatcgtatggagaagacacggcatggatctaatggaggtcacattccctggactggc tgtattttctgatggtacactttacttagagtctgtggatatccaccatataggtaactggacatgtcacgacagagaca aacctggagtcaaacaagtccatgtactagacgtacacttaccacccattgtatcagtggcgccctctacacagcttttc ccggaggataacactgacatttacatccactgccatgctgacggaatcccgaaacccacgctagaatgggaggtcaatgg acacaaactaccggataaacaagatcacttcatacgcacacatgataacggtagtttgattatctaccaatcaaactatc agacggacacagggacatacaaatgtataggcaagaatgctgcagggaaggcagaggacgtagcgacagtctacatacag aaacccaatcaaacagatatagcaaactaccacatgagcaggcatgaatctttcttcgtcttccacaaaaatggcttcac cgtgtacgatccaacgggctgctatttcaaacgacatgtcaaggaaaccttcggtaacctgttgcacatgccagaggaac ttgactccgccccctccctgtgtcctggggtaggggagtgccgatggggacagtccgtcaatgtgatgggcaagtttgtg tacgtcagtcaaccgtatcagagcagagttgtggtcattgatgcggaaaagacgcttaatccagtagagtttatccaaac agaccactatcccagtaaaatctattacattgagcacctggatgaagtatgggtgttatgctggaactcggaccagagta ccgggtctaaaacgatcatcgttatacgtgaggccagcaaggagatacgtcaccatatagtacacacacagcccatagga tacaggtttgatttgcatccgagccaatcagagcaagtcaccattcaaattcttctagattacatcacagacacacccct cggaaacttgacgctgtatggtaccccatacataaccccggactccaggaatgtagtcactgtagataaaataaggggag atgtcagggtggcagaggtgcttaaaaatggtaacattaagaaagcatttgacgtcacagttggatcgagcgtcagtgat gtgacctttttgccctcagagttaggttcaggatacgatgcattcctcacatcagcagaatcacctgaagtattttccat taatctatccaacggaaaaattacaacaataaaagacgtagatgaccctcgtcagacgagagttacaccattttccgctg ccacacgctcaatcaccagcggagatgttttcagtgaattcgtagcatcaccaggaagatcatcgttattcatttttaac ggaaaacataataaagttcattgtcagttttataatttattggacccagactctgtgaaggatacttaa |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23392.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23392.t1 MIPGRSPFMCSKATSSVANLIECHDTCVRGHCQAFRFKNDGSEFCEIFFDKSCIPMLEKGKDNYYVRRCANPEDCKYEEV ESKGGAPCEIVSSNTDTFEKCRESCSSCVAFKYLYDSGECSLFQQTSCITKKNINYIKRDCHRPEIEAGTTTDVNHVIAM APTQDHLSVKKELKDNVENQDDTIVKGDQNKQTTVIIPTAEPKSDQQVQRNSGLDHLEVVEGGAKTMQDPDAKEVKKDGR TGVSDVKVDQDPDTLYGESGEKDDDSMYEKICTLQEYNRMKGDILRYHCVKLGEAHCGDTQIPKKSYIATLMFSFYDRNM DESIQKDELWEIWLMENFDKMFSSCTLLDLFKFENIKDDAIYKDDFLDIFDIPEAAMQEEIQVITTLATVGNGLEIRCGL QPSSDVSQIVWRRHGMDLMEVTFPGLAVFSDGTLYLESVDIHHIGNWTCHDRDKPGVKQVHVLDVHLPPIVSVAPSTQLF PEDNTDIYIHCHADGIPKPTLEWEVNGHKLPDKQDHFIRTHDNGSLIIYQSNYQTDTGTYKCIGKNAAGKAEDVATVYIQ KPNQTDIANYHMSRHESFFVFHKNGFTVYDPTGCYFKRHVKETFGNLLHMPEELDSAPSLCPGVGECRWGQSVNVMGKFV YVSQPYQSRVVVIDAEKTLNPVEFIQTDHYPSKIYYIEHLDEVWVLCWNSDQSTGSKTIIVIREASKEIRHHIVHTQPIG YRFDLHPSQSEQVTIQILLDYITDTPLGNLTLYGTPYITPDSRNVVTVDKIRGDVRVAEVLKNGNIKKAFDVTVGSSVSD VTFLPSELGSGYDAFLTSAESPEVFSINLSNGKITTIKDVDDPRQTRVTPFSAATRSITSGDVFSEFVASPGRSSLFIFN GKHNKVHCQFYNLLDPDSVKDT |
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