Gene
| Gene Model ID | pfu_aug2.0_77.1_23398 |
|---|---|
| Locus | scaffold77.1 : 454070 ... 464169 : - |
| To GenomeBrowser | scaffold77.1:454070..464169 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_109.1_21999 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23398.t1 | 1 | 1 | F-box | 23 | 58 | 1.1e-07 | 31.3 | 5.7e-10 | 3.5e-07 | 29.7 |
| pfu_aug2.0_77.1_23398.t1 | 1 | 1 | F-box-like | 26 | 55 | 2.0e-06 | 27.4 | 8.7e-09 | 5.4e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23398.t1 | gi|749781778|ref|XP_011145128.1| | PREDICTED: F-box only protein 28 isoform X1 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_77.1_23398.t1 | gi|557017175|ref|XP_006009000.1| | PREDICTED: F-box only protein 28 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_77.1_23398.t1 | gi|665786715|ref|XP_008553737.1| | PREDICTED: F-box only protein 28-like [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_77.1_23398.t1 | gi|527267616|ref|XP_005151928.1| | PREDICTED: F-box only protein 28 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_77.1_23398.t1 | gi|688581598|ref|XP_684144.5| | PREDICTED: F-box only protein 28 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23398.t1 atggcttccatagatgtgttaggcctagactctgacgaaaacacagagaacgaagaaagcgatgaattgtttggtttgcc agaagaattagttgaaaaaattctatcatatatgaccttcaacgaacttgctgaatcaagactcgtctgtaagaggttca acaaatggagtgagcggctacttaacgcaggtttttcaaaagtagacaagctacatgctcaaactcagaagcatgtgaag agccagctacctcgtcgagagtcggagagacgtaaccacaccctggcaagacacgtggatatactgtcagctatagagac cagactctcactactagggatgacgtatatgagatatatagatatgggtctatgctgctttataccaggaaaggttttag atgaattgttccgtatcttgaactcattacaagacactaagcagcctcccagagcccatgagttcctccaggagttacgt gacatatcgtccatggcgatggaacacttcgaggagaagatagctccagccctgaaaaataaaatgccggcggtaactct gccgtttccgtttggggattgcaccagcccagagtcatctcaaggttcgcccatgcctttgacagtaacaactccacaaa ggggactgcttcttagacaggaaatcgtccgccttcaaaatcagatgcgatcacagatgggcagtaacagggagctgaga aaggacttgaacgatctgagaggaagacattttgaattgcagaaaaaatcaactaaacaagaaaagaaaattcaaactca aacaaggcaactgagtgaccttagcaagaaaatattggaatacgatcagaaattttctgacttatattcggaaatttcga ggatgaaaaacgacagtgagaattctgaagcaagcactagtagtgcgattttacccgtagaagatacaagtaatcttaaa cggaaacaattatctgacatacggagaagagatggtctcaaacggaagtgtctgcatgatgatgtatcctctaagaaaag taaaaagagctaa |
|
Protein
| Protein ID | pfu_aug2.0_77.1_23398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23398.t1 MASIDVLGLDSDENTENEESDELFGLPEELVEKILSYMTFNELAESRLVCKRFNKWSERLLNAGFSKVDKLHAQTQKHVK SQLPRRESERRNHTLARHVDILSAIETRLSLLGMTYMRYIDMGLCCFIPGKVLDELFRILNSLQDTKQPPRAHEFLQELR DISSMAMEHFEEKIAPALKNKMPAVTLPFPFGDCTSPESSQGSPMPLTVTTPQRGLLLRQEIVRLQNQMRSQMGSNRELR KDLNDLRGRHFELQKKSTKQEKKIQTQTRQLSDLSKKILEYDQKFSDLYSEISRMKNDSENSEASTSSAILPVEDTSNLK RKQLSDIRRRDGLKRKCLHDDVSSKKSKKS |
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