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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_77.1_23404
Locus scaffold77.1 : 529070 ... 536433 : +
To GenomeBrowser scaffold77.1:529070..536433
Genes list of scaffold scaffold77.1
Synonym pfu_aug1.0_3921.1_37745

Manual annotation
Transcript
Transcript IDpfu_aug2.0_77.1_23404.t1
Definition-
>pfu_aug2.0_77.1_23404.t1
atgtccaagagaaagtgcagttgctacaatcatgaaaaattcaccgtagacaattcatgtgaatctaagttaataagaag
agatgcaaaaaagattaaaaaagaaataattgatactcttgtgcaaaatggacacttaagtgaaaggtttacctatctct
gtgcatcatgttgcaaacatgcagagaatatcatacaggagcaaaataagaaaaaatattcactttctgaaagtctagaa
aaagttatagagggaataaaaaaagactggttttctgaagaaaacttggttcggctgtccacagttattggtgcatctca
atcagaaaaagtcttcaaggactcgattgaagcagggaagtgctttaaagatgaaaaatgtctcgaaaatttcgacgtat
cagactggatccagcatcgaaaccctgttgtatcctctttcatctcagcgattggtggaagcaaagggaaacgtttagat
gtggccaaggccattgacgcaacgtacttcgtcacaaataacagttttgtcgcccctcttgcgtttggtcaaaatcttat
caactattttgaaacaggcagcaaaacaggcgttaagattctctcatcaggaaatccatgtggatcttacacaacaatat
taaattttgtgaaggacgcccaaccgccaaaagtgcctacggacggtgacatggttacatttttcgataacaatcagatg
gtggagaaaaagtggcatgttgaagccaatttcaagtccaaatcaagtgtagttacctcaaacattcacatccgtcatcc
atccatccttcaagaaaagtcagaactctctccgttgatttggtaccatccagtccctttggatagttctattgttgacc
tgaaaaaatatatagagaaacaacaagaaacgttcatacatttccggaatacattcgtagacgatttactcaaaaagttg
ctggatgacactgaattggtacctcatgcaactgaaaggtatacgttcattcctagttgtcataatcaagacactttaaa
gccagaattgataatgggagaagcaatccttgaaaatccatgctccggtgaatctcttcaaattgtaaggctctaa
Transcript IDpfu_aug2.0_77.1_23404.t2
Definition-
>pfu_aug2.0_77.1_23404.t2
atgtccaagagaaagtgcagttgctacaatcatgaaaaattcaccgtagacaattcatgtgaatctaagttaataagaag
agatgcaaaaaagattaaaaaagaaataattgatactcttgtgcaaaatggacacttaagtgaaaggtttacctatctct
gtgcatcatgttgcaaacatgcagagaatatcatacaggagcaaaataagaaaaaatattcactttctgaaagtctagaa
aaagttatagagggaataaaaaaagactggttttctgaagaaaacttggttcggctgtccacagttattggtgcatctca
atcagaaaaagtcttcaaggactcgattgaagcagggaagtgctttaaagatgaaaaatgtctcgaaaatttcgacgtat
cagactggatccagcatcgaaaccctgttgtatcctctttcatctcagcgattggtggaagcaaagggaaacgtttagat
gtggccaaggccattgacgcaacgtacttcgtcacaaataacagttttgtcgcccctcttgcgtttggtcaaaatcttat
caactattttgaaacaggcagcaaaacaggcgttaagattctctcatcaggaaatccatgtggatcttacacaacaatat
taaattttgtgaaggacgcccaaccgccaaaagtgcctacggacggtgacatggttacatttttcgataacaatcagatg
gtggagaaaaagtggcatgttgaagccaatttcaagtccaaatcaagtgtagttacctcaaacattcacatccgtcatcc
atccatccttcaagaaaagtcagaactctctccgttgatttggtaccatccagtccctttggatagttctattgttgacc
tgaaaaaatatatagagaaacaacaagaaacgttcatacatttccggaatacattcgtagacgatttactcaaaaagttg
ctggatgacactgaattggtacctcatgcaactgaaaggtatacgttcattcctagttgtcataatcaagacactttaaa
gccagaattgataatgggagaagcaatccttgaaaatccatgctccggtgaatctcttcaaattgtgttcgacagtatga
tgaaggacgtcataacgaacaaacgaaaatggtgtatcctaggatgtgatggtctcccatacaacatcgggtccaaaata
attgatgacatccatgtatgtccagtggcaagatgccaaagagaatttgaatccaagatagatttcgaggaacacctcca
tacgtttggtcacgaagcagaccctttgctctgcaggaaatacgccaatatccttcttctcccaggttaa
Transcript IDpfu_aug2.0_77.1_23404.t3
Definition-
>pfu_aug2.0_77.1_23404.t3
atgtccaagagaaagtgcagttgctacaatcatgaaaaattcaccgtagacaattcatgtgaatctaagttaataagaag
agatgcaaaaaagattaaaaaagaaataattgatactcttgtgcaaaatggacacttaagtgaaaggtttacctatctct
gtgcatcatgttgcaaacatgcagagaatatcatacaggagcaaaataagaaaaaatattcactttctgaaagtctagaa
aaagttatagagggaataaaaaaagactggttttctgaagaaaacttggttcggctgtccacagttattggtgcatctca
atcagaaaaagtcttcaaggactcgattgaagcagggaagtgctttaaagatgaaaaatgtctcgaaaatttcgacgtat
cagactggatccagcatcgaaaccctgttgtatcctctttcatctcagcgattggtggaagcaaagggaaacgtttagat
gtggccaaggccattgacgcaacgtacttcgtcacaaataacagttttgtcgcccctcttgcgtttggtcaaaatcttat
caactattttgaaacaggcagcaaaacaggcgttaagattctctcatcaggaaatccatgtggatcttacacaacaatat
taaattttgtgaaggacgcccaaccgccaaaagtgcctacggacggtgacatggttacatttttcgataacaatcagatg
gtggagaaaaagtggcatgttgaagccaatttcaagtccaaatcaagtgtagttacctcaaacattcacatccgtcatcc
atccatccttcaagaaaagtcagaactctctccgttgatttggtaccatccagtccctttggatagttctattgttgacc
tgaaaaaatatatagagaaacaacaagaaacgttcatacatttccggaatacattcgtagacgatttactcaaaaagttg
ctggatgacactgaattggtacctcatgcaactgaaaggtatacgttcattcctagttgtcataatcaagacactttaaa
gccagaattgataatgggagaagcaatccttgaaaatccatgctccggtgaatctcttcaaatttttgataaagactga

Protein
Protein IDpfu_aug2.0_77.1_23404.t1
Definition-
>pfu_aug2.0_77.1_23404.t1
MSKRKCSCYNHEKFTVDNSCESKLIRRDAKKIKKEIIDTLVQNGHLSERFTYLCASCCKHAENIIQEQNKKKYSLSESLE
KVIEGIKKDWFSEENLVRLSTVIGASQSEKVFKDSIEAGKCFKDEKCLENFDVSDWIQHRNPVVSSFISAIGGSKGKRLD
VAKAIDATYFVTNNSFVAPLAFGQNLINYFETGSKTGVKILSSGNPCGSYTTILNFVKDAQPPKVPTDGDMVTFFDNNQM
VEKKWHVEANFKSKSSVVTSNIHIRHPSILQEKSELSPLIWYHPVPLDSSIVDLKKYIEKQQETFIHFRNTFVDDLLKKL
LDDTELVPHATERYTFIPSCHNQDTLKPELIMGEAILENPCSGESLQIVRL
Protein IDpfu_aug2.0_77.1_23404.t2
Definition-
>pfu_aug2.0_77.1_23404.t2
MSKRKCSCYNHEKFTVDNSCESKLIRRDAKKIKKEIIDTLVQNGHLSERFTYLCASCCKHAENIIQEQNKKKYSLSESLE
KVIEGIKKDWFSEENLVRLSTVIGASQSEKVFKDSIEAGKCFKDEKCLENFDVSDWIQHRNPVVSSFISAIGGSKGKRLD
VAKAIDATYFVTNNSFVAPLAFGQNLINYFETGSKTGVKILSSGNPCGSYTTILNFVKDAQPPKVPTDGDMVTFFDNNQM
VEKKWHVEANFKSKSSVVTSNIHIRHPSILQEKSELSPLIWYHPVPLDSSIVDLKKYIEKQQETFIHFRNTFVDDLLKKL
LDDTELVPHATERYTFIPSCHNQDTLKPELIMGEAILENPCSGESLQIVFDSMMKDVITNKRKWCILGCDGLPYNIGSKI
IDDIHVCPVARCQREFESKIDFEEHLHTFGHEADPLLCRKYANILLLPG
Protein IDpfu_aug2.0_77.1_23404.t3
Definition-
>pfu_aug2.0_77.1_23404.t3
MSKRKCSCYNHEKFTVDNSCESKLIRRDAKKIKKEIIDTLVQNGHLSERFTYLCASCCKHAENIIQEQNKKKYSLSESLE
KVIEGIKKDWFSEENLVRLSTVIGASQSEKVFKDSIEAGKCFKDEKCLENFDVSDWIQHRNPVVSSFISAIGGSKGKRLD
VAKAIDATYFVTNNSFVAPLAFGQNLINYFETGSKTGVKILSSGNPCGSYTTILNFVKDAQPPKVPTDGDMVTFFDNNQM
VEKKWHVEANFKSKSSVVTSNIHIRHPSILQEKSELSPLIWYHPVPLDSSIVDLKKYIEKQQETFIHFRNTFVDDLLKKL
LDDTELVPHATERYTFIPSCHNQDTLKPELIMGEAILENPCSGESLQIFDKD

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Okinawa Institute of Science and Technology
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