Gene
| Gene Model ID | pfu_aug2.0_770.1_01117 |
|---|---|
| Locus | scaffold770.1 : 93576 ... 120665 : + |
| To GenomeBrowser | scaffold770.1:93576..120665 |
| Genes list of scaffold | scaffold770.1 |
| Synonym | pfu_aug1.0_8190.1_67818 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_770.1_01117.t1 | 2 | 1 | CP2 | 80 | 123 | 0.0 | 270.1 | 5.8e-15 | 1.4e-11 | 43.8 |
| pfu_aug2.0_770.1_01117.t1 | 2 | 2 | CP2 | 214 | 410 | 0.0 | 270.1 | 0.0 | 0.0 | 224.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_770.1_01117.t1 | gi|524874594|ref|XP_005094032.1| | PREDICTED: transcription factor CP2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_770.1_01117.t1 | gi|676481911|ref|XP_009062529.1| | hypothetical protein LOTGIDRAFT_128306 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_770.1_01117.t1 | gi|742184391|ref|XP_010888851.1| | PREDICTED: alpha-globin transcription factor CP2 isoform X3 [Esox lucius] | 0.0 |
| pfu_aug2.0_770.1_01117.t1 | gi|585712043|ref|XP_006900289.1| | PREDICTED: alpha-globin transcription factor CP2 isoform X4 [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_770.1_01117.t1 | gi|585712032|ref|XP_006900286.1| | PREDICTED: alpha-globin transcription factor CP2 isoform X1 [Elephantulus edwardii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_770.1_01117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_770.1_01117.t1 atgacggagtccgaggaggttgttggacagatgtcctttgcgtgggtctctgatgccctggtttcccaaggaggcaagag gacaaagatgtcccatccggccagcaaccccatcaccagctgggaaattaacgattccctggccgcagattttgatgggt ctttatcggggttaggcacggagataggtaccaacagctataacatgagtgaggctttgttggcactaccagttttcaag tcagaaaacttagacacaggattccaatatattctgggtgcagccacttctccagctgtgaaaatgaatgaagaaacatt aacctacctcaatcaaggacaatcttacgaaataaaagtgaagaagcttggagatttatccgatttcagagggaagtacc ttaagacggagtccgaggaggttgttggacagatgtcctttgcgtgggtctctgatgccctggtttcccaaggaggcaag aggacaaagatgtcccatccggccagtaaccccatcaccagctgggaaattaacgattccctggccgcagattttgatgg gtctttatcggggttaggcacggagataggtaccaacagctataacatgagtgaggccctgttggcactaccagttttca agtcagaaaacttagattcaggattccaatatattctgggtgcagccacatctccagctgtgaaaatgaatgaagaaaca ttaacctacctcaatcaaggacaatcttacgaaataaaagtgaagaagcttggagatttatccgacttcagagggaagta ccttaagagtgttgtgaaagtatgtttccatgaacgacggttacagtacatggaaaaagaacagataatgaactggaaac agacgcggccgggagagagaatattagatattgatataccactctcatacggtcttattgagataaaaatagaaaacgaa tgtctgaattctgccgagtttatttgggacccaacaaaggagacgggagtctatatcaaagttcactgtataagtacaga gtttactgccaagaaacatggtggggagaagggtgtcccctttaggatccaggtggagacttattcatatggggaggatc caaaaattcttcactgcgcatcatgtcaggtcaaagttttcaagcctaaaggtgcagacagaaaacacaaaactgacagg gagaaaatggaaaagcgaagtgaatcagaaaaggagaagtatcagccttcttacgaatgtacagttcttacagaggttcc tctggaccaagtaacagcaagtatcacatcaccgagtctcagcctgaaaaataattcgtttgcgacacttgcccagagtt tctcagaactgtcggcagctccttcaccctacattgcttatgacgttgttaagcgcacacttctggtttcagttgatatg gccttgaccccagatgccaatgcagcagaggtcacaaactggctccaagcaaacagattctcatcatatgtacgcatatt ccagaattttacaggggctgatttactgcggttgacaagggacgaccttattcagatctgtggattagctgatggtatca gactagataatgccatgcaggcaaaaacagtgaggccaagaaaattaatatatgtttgtcaggagacagattctgtatac cacgccatttatctggagacgttaatgaaggcagagttagtggttaagttagcagcattgtacagtgtaggtccacaaca aatacgggaactctactgccagggaccctcagggatttatgttctgatcacagatgaggtggttcataatttgaaagatc aagccaggttcttggtggaagcaatgaaattataccacgccatttatctggagaccttaatgaaggcagaattagtggtt aaattggcagcattgtacagtgtaggtccacaacaaatacaggaactctactgccagggaccctcagggatttatgttct ggtcacagatgagagcaccgtttacttgtccatagcctgtagctatacatcatgtcatgacgttatttggtcaaagatcg caggatgtgatgatgtcatatgtacacgtcgcactaaaacttgtaactaa |
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Protein
| Protein ID | pfu_aug2.0_770.1_01117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_770.1_01117.t1 MTESEEVVGQMSFAWVSDALVSQGGKRTKMSHPASNPITSWEINDSLAADFDGSLSGLGTEIGTNSYNMSEALLALPVFK SENLDTGFQYILGAATSPAVKMNEETLTYLNQGQSYEIKVKKLGDLSDFRGKYLKTESEEVVGQMSFAWVSDALVSQGGK RTKMSHPASNPITSWEINDSLAADFDGSLSGLGTEIGTNSYNMSEALLALPVFKSENLDSGFQYILGAATSPAVKMNEET LTYLNQGQSYEIKVKKLGDLSDFRGKYLKSVVKVCFHERRLQYMEKEQIMNWKQTRPGERILDIDIPLSYGLIEIKIENE CLNSAEFIWDPTKETGVYIKVHCISTEFTAKKHGGEKGVPFRIQVETYSYGEDPKILHCASCQVKVFKPKGADRKHKTDR EKMEKRSESEKEKYQPSYECTVLTEVPLDQVTASITSPSLSLKNNSFATLAQSFSELSAAPSPYIAYDVVKRTLLVSVDM ALTPDANAAEVTNWLQANRFSSYVRIFQNFTGADLLRLTRDDLIQICGLADGIRLDNAMQAKTVRPRKLIYVCQETDSVY HAIYLETLMKAELVVKLAALYSVGPQQIRELYCQGPSGIYVLITDEVVHNLKDQARFLVEAMKLYHAIYLETLMKAELVV KLAALYSVGPQQIQELYCQGPSGIYVLVTDESTVYLSIACSYTSCHDVIWSKIAGCDDVICTRRTKTCN |
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