Gene
| Gene Model ID | pfu_aug2.0_772.1_07869 |
|---|---|
| Locus | scaffold772.1 : 159066 ... 166657 : + |
| To GenomeBrowser | scaffold772.1:159066..166657 |
| Genes list of scaffold | scaffold772.1 |
| Synonym | pfu_aug1.0_1182.1_51220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_772.1_07869.t1 | 2 | 1 | AAA_11 | 8 | 283 | 4.0e-38 | 131.3 | 5.40004e-41 | 4.0e-38 | 131.3 |
| pfu_aug2.0_772.1_07869.t1 | 2 | 1 | AAA_30 | 8 | 71 | 3.1e-11 | 43.2 | 3.1e-07 | 0.00023 | 20.7 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 1 | AAA_12 | 11 | 64 | 0.0 | 167.1 | 1.6 | 1200.0 | -1.3 |
| pfu_aug2.0_772.1_07869.t1 | 2 | 1 | AAA_19 | 13 | 78 | 2.4e-08 | 33.6 | 5.4e-10 | 4.0e-07 | 29.6 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 1 | DUF2075 | 22 | 82 | 6.7e-06 | 25.3 | 2.5e-05 | 0.019 | 13.9 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 1 | Viral_helicase1 | 25 | 44 | 2.4e-09 | 37.0 | 0.0068 | 5.1 | 6.5 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 2 | AAA_12 | 170 | 209 | 0.0 | 167.1 | 0.85 | 630.0 | -0.5 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 2 | Viral_helicase1 | 239 | 278 | 2.4e-09 | 37.0 | 2.5e-05 | 0.019 | 14.5 |
| pfu_aug2.0_772.1_07869.t1 | 2 | 2 | AAA_30 | 240 | 279 | 3.1e-11 | 43.2 | 5.4e-07 | 0.0004 | 20.0 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 2 | DUF2075 | 252 | 314 | 6.7e-06 | 25.3 | 1.7 | 1300.0 | -2.0 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 3 | AAA_12 | 291 | 514 | 0.0 | 167.1 | 0.0 | 0.0 | 164.9 |
| pfu_aug2.0_772.1_07869.t1 | 2 | 2 | AAA_11 | 389 | 425 | 4.0e-38 | 131.3 | 1.6 | 1200.0 | -1.2 |
| pfu_aug2.0_772.1_07869.t1 | 2 | 2 | AAA_19 | 389 | 427 | 2.4e-08 | 33.6 | 0.38 | 280.0 | 1.3 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 3 | Viral_helicase1 | 430 | 511 | 2.4e-09 | 37.0 | 0.00011 | 0.084 | 12.3 |
| pfu_aug2.0_772.1_07869.t1 | 3 | 3 | DUF2075 | 447 | 511 | 6.7e-06 | 25.3 | 0.002 | 1.5 | 7.7 |
Transcript
| Transcript ID | pfu_aug2.0_772.1_07869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_772.1_07869.t1 atgggtaatcttcaaagaaataatacacgtcagagggaagcacttgagaaagccttacggaaaagctttagtttgatcca tgggcctccaggtacaggaaaaactacaacgggaatcaaacttataaacgttttccacgaactgaatacggcccttgaag tagatggaaagcagaaacaaataattttctgtggccagtcaaacaaatctgttgaccttgtagcaaaaatgttcagaaga aagttccctgcatcggagttgagacttgttcgcctctatggaacttccattgaaaatcaagactaccctgttcccggtag acatatctccgaatcgtcttctgcgaaaagctcaaaaccagatccagagctgtcggacatatccatgcataaactaatcc gtggatcagaaacggaattaagtgacgccataaaaggatatgatagaaaatttgaggatcacttcaaggcacaggagcga aaaaaagacaaagtgaagaacattttgaagcatgcgcaaaagcaagagaaaaaagaatttttcactgaaatgtgtaataa aaggtctggcaaaaaagtttctgtacttcaagacatacgcacttacaataaacttattacgaaagcgaccataaaggagt tacagaattttgatgtgattttttgcactacttccgttgctactagtccaaggtgtttacgggcagtacacggacgtgtt tctcagcttattatagacgagtgtggcatgtgcacagaaacagaaagtatggccaccatcatagcaacgaagccaaaaca agttgtgttgatcggggaccataaacagttacagccatttgttacctgtagggaagctggagatttagggctagaaaaat ctttatttgagagatatgctaagaaatcagcattcacttttctgaatctacaatacagaatgcatcctgaaatatgtaag cttccatctcgtctgttctacgagaacaaactacaaaccggaaatccagactcatcgtcgaaataccaagccttaagctt atggccgaaaaaagacgttccgcatatcttcatacatgttgagggagaggaagagttaatggcagtgacaactgaaaagg gaaatgtaaggtcgtgcagcaacaaggcggaagtgaaacaagtgatgaaattatttagacatctttgggaaaaagaaaat gtcaatccgaatgatatcaacctaatgtcccaatacaacgctcaatgctcagcaattagagaggccctggagaaagaact cgctttctacaacagcaaaatgccaacacatattgatgtacacaaatttgtaaacagtaatgttaatactgtggttggaa gtcaaggtgccgaatgggattatgtcatttttacaacagctcgatccctaccccggtacaaaattgaaccaattccaacc agaggctggaaaactgaaaatcttggtttcacgactgatgaacatcaaattaatgtagccctgaccagagcaaagagggg gctcttcattgttggcaacacaaatttgctaagatgtgacaacaattggaaagaattgattggaaaatacaatagacaag gatgtattgtaaatggtgatgatttccctctaaactaa |
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Protein
| Protein ID | pfu_aug2.0_772.1_07869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_772.1_07869.t1 MGNLQRNNTRQREALEKALRKSFSLIHGPPGTGKTTTGIKLINVFHELNTALEVDGKQKQIIFCGQSNKSVDLVAKMFRR KFPASELRLVRLYGTSIENQDYPVPGRHISESSSAKSSKPDPELSDISMHKLIRGSETELSDAIKGYDRKFEDHFKAQER KKDKVKNILKHAQKQEKKEFFTEMCNKRSGKKVSVLQDIRTYNKLITKATIKELQNFDVIFCTTSVATSPRCLRAVHGRV SQLIIDECGMCTETESMATIIATKPKQVVLIGDHKQLQPFVTCREAGDLGLEKSLFERYAKKSAFTFLNLQYRMHPEICK LPSRLFYENKLQTGNPDSSSKYQALSLWPKKDVPHIFIHVEGEEELMAVTTEKGNVRSCSNKAEVKQVMKLFRHLWEKEN VNPNDINLMSQYNAQCSAIREALEKELAFYNSKMPTHIDVHKFVNSNVNTVVGSQGAEWDYVIFTTARSLPRYKIEPIPT RGWKTENLGFTTDEHQINVALTRAKRGLFIVGNTNLLRCDNNWKELIGKYNRQGCIVNGDDFPLN |
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