Gene
| Gene Model ID | pfu_aug2.0_773.1_11171 |
|---|---|
| Locus | scaffold773.1 : 50337 ... 86315 : - |
| To GenomeBrowser | scaffold773.1:50337..86315 |
| Genes list of scaffold | scaffold773.1 |
| Synonym | pfu_aug1.0_382.1_36523 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable glutamate--trna mitochondrial-like | GO:0004812 GO:0006412 GO:0043039 GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_773.1_11171.t1 | 1 | 1 | tRNA-synt_1c | 215 | 488 | 0.0 | 224.7 | 0.0 | 0.0 | 224.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_773.1_11171.t1 | gi|524889730|ref|XP_005101419.1| | PREDICTED: probable glutamate--tRNA ligase, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_773.1_11171.t1 | gi|24665321|ref|NP_648894.2| | CG4573 [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_773.1_11171.t1 | gi|198462849|ref|XP_001352579.2| | GA18268 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
| pfu_aug2.0_773.1_11171.t1 | gi|195590819|ref|XP_002085142.1| | GD12470 [Drosophila simulans] | 0.0 |
| pfu_aug2.0_773.1_11171.t1 | gi|195496462|ref|XP_002095701.1| | GE22553 [Drosophila yakuba] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_773.1_11171.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_773.1_11171.t1 atgagtttcatggtaaatggcacgcctactcctaggaatatggagaggaatttacctggatcagcaaggcatcgtccggg gagcggaaggcctccaagtgccaaaccaatggtcaacagaaatcccatcacaggaatagagactccaatcaggactgaat caagaactggtgatcntatttatcatattcacaccagagtgcctgctctgaatttgaaagcatttcaaggtgaagacaga gtgataggggtacctgtagaattaggggaataccctttacatacccctaacacagcttctactgtaagttggggcacccc ttgtagcacagcacggaatgaatcctacagaccgtcaaataggactcttaagccacagagcagtaaaagttcacgtcctg acggagtgccgggtctctacttcggatatagtgatgaacctcaacagaaacacaaggcagctaaacaaaaggaggtatac tctataggattgatattctgttcaactgttctgggagaaccaggggacaagaagatgacgagaatgacagagacgagggc tatagggacgaagcctaatgacgatgcactagggaaggctcttggattgctcaatgcaaaactggacaagctggaggcta ggacaagaactatccctggtgctactgaaaatctgattgacattctaaaatggagtggaattcaccctgatgaaggtcca gaatttggtggtagttatggaccgtatattcagtcacaaagaacagaactgtacagggagcagatagaaaaattgttaca gaatggctcagcttacagatgtttctgtactccaaagaggttagagttgctgaagaaagatgcttacagaagaggggagg tgccaaagtatgataataaatgtcgacatcttacaagccaggaagtccaggaaaaattgaacaataatgagccttatgtt ataagatttaagcttccttcatcagatgtacgatgggacgatatggttttaggtcctgttaccatcaatattgcctcctt ggaaggagatccagtactgataaagtcagacaattttcccacgtatcactttgccaatgttgttgatgatcatttcatga aaatatcacacgtactcagaggaatagaatggcaggtatcaacgcccaagcaccttttgctgtatgaggcttttggatgg acaccccctagttatggacatcttcctctaatcaaaaacaaggatggtacaaagctttctaaaagacaaggtgacattca catagaacattttaagagtctttattattcacctcagtccattgtaaagtatgttacgctggtcggtggagggtttgaag gaaaatcggaggatgactgtgatacaatacaagatttagccagtaagtttcacatagatttgataaaaagtaacccagcc tgtttagacccagagaagttggagattatcagtaaacaatacctgtataaagatattgaggaaaaccaagatgatactgt caaaacgatacaggaaatcgtttcaaaatggcttctagataaatatggtaacctatcaaagtttgaagaagttttatcaa cagaatatatacaaaatattcttcattggtgtaggaaggaagagaggataaataaattaggtgacctaatatcagaggaa ttttcatttgtatggacactgccaaatgaaaaagacattgaaaatgctctgaaaaacattcctgaaacacataatgattt actacgtggaacaatacaaatacttcagtcagttgaagacagtgactttgaaaaaaacttttcttcaaaactcaaaaagc tcgtcaagaatgagggacttcaagtaaaatatgtgttctctttactcaggaaattattaacaggattggaggatggacca cctgtagctcagattgtctctgttattggaaaggaatcggctgtgaaaagactggaaaattgcattaaaatcttaaactc accatcctctttaaattga |
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Protein
| Protein ID | pfu_aug2.0_773.1_11171.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_773.1_11171.t1 MSFMVNGTPTPRNMERNLPGSARHRPGSGRPPSAKPMVNRNPITGIETPIRTESRTGDXIYHIHTRVPALNLKAFQGEDR VIGVPVELGEYPLHTPNTASTVSWGTPCSTARNESYRPSNRTLKPQSSKSSRPDGVPGLYFGYSDEPQQKHKAAKQKEVY SIGLIFCSTVLGEPGDKKMTRMTETRAIGTKPNDDALGKALGLLNAKLDKLEARTRTIPGATENLIDILKWSGIHPDEGP EFGGSYGPYIQSQRTELYREQIEKLLQNGSAYRCFCTPKRLELLKKDAYRRGEVPKYDNKCRHLTSQEVQEKLNNNEPYV IRFKLPSSDVRWDDMVLGPVTINIASLEGDPVLIKSDNFPTYHFANVVDDHFMKISHVLRGIEWQVSTPKHLLLYEAFGW TPPSYGHLPLIKNKDGTKLSKRQGDIHIEHFKSLYYSPQSIVKYVTLVGGGFEGKSEDDCDTIQDLASKFHIDLIKSNPA CLDPEKLEIISKQYLYKDIEENQDDTVKTIQEIVSKWLLDKYGNLSKFEEVLSTEYIQNILHWCRKEERINKLGDLISEE FSFVWTLPNEKDIENALKNIPETHNDLLRGTIQILQSVEDSDFEKNFSSKLKKLVKNEGLQVKYVFSLLRKLLTGLEDGP PVAQIVSVIGKESAVKRLENCIKILNSPSSLN |
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