Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_773.1_11172
Locus scaffold773.1 : 115398 ... 124225 : -
To GenomeBrowser scaffold773.1:115398..124225
Genes list of scaffold scaffold773.1
Synonym pfu_aug1.0_832.1_29447

Manual annotation
Annotation by Blast2GO
Annotation GO
dual oxidase 1 GO:0016020 GO:0016491 GO:0043167 GO:0044699 GO:0097159 GO:1901363

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_773.1_11172.t1 2 1 EF-hand_8 148 194 1.3e-06 27.8 6.9e-08 0.0001 21.8
pfu_aug2.0_773.1_11172.t1 3 1 EF-hand_6 150 161 9.5e-08 31.3 2.9 4300.0 -1.9
pfu_aug2.0_773.1_11172.t1 2 1 EF-hand_7 167 193 4.7e-07 29.8 2.9e-06 0.0043 17.1
pfu_aug2.0_773.1_11172.t1 2 1 EF-hand_1 169 193 3.3e-09 35.3 2.6e-09 3.9e-06 25.7
pfu_aug2.0_773.1_11172.t1 3 2 EF-hand_6 170 193 9.5e-08 31.3 6.6e-07 0.00098 18.8
pfu_aug2.0_773.1_11172.t1 2 2 EF-hand_1 208 231 3.3e-09 35.3 0.00024 0.35 10.2
pfu_aug2.0_773.1_11172.t1 3 3 EF-hand_6 208 230 9.5e-08 31.3 0.00012 0.17 11.8
pfu_aug2.0_773.1_11172.t1 2 2 EF-hand_7 208 254 4.7e-07 29.8 9.6e-05 0.14 12.2
pfu_aug2.0_773.1_11172.t1 2 2 EF-hand_8 217 253 1.3e-06 27.8 0.0016 2.3 7.8
pfu_aug2.0_773.1_11172.t1 1 1 Ferric_reduct 316 461 4.7e-12 46.0 5.8e-15 8.5e-12 45.2
pfu_aug2.0_773.1_11172.t1 1 1 FAD_binding_8 502 599 7.3e-21 74.0 1.2e-23 1.8e-20 72.7
pfu_aug2.0_773.1_11172.t1 1 1 NAD_binding_6 611 762 5.7e-30 104.2 6.6e-33 9.9e-30 103.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_773.1_11172.t1 gi|642911861|ref|XP_008200778.1| PREDICTED: dual oxidase 1-like [Tribolium castaneum] 0.0
pfu_aug2.0_773.1_11172.t1 gi|699253787|ref|XP_009861227.1| PREDICTED: dual oxidase 1 [Ciona intestinalis] 0.0

Transcript
Transcript IDpfu_aug2.0_773.1_11172.t1
Definition-
>pfu_aug2.0_773.1_11172.t1
atgggatacagagaaggaatgagacgtataatgcttatcttagaacgatcgaaaaatcaaatactggtaaaggacctcct
tggtcaaaccctgaggataatagacttggtagaagagaacgtagtaaacatattgctaagtgctgccgggaagaaacgaa
aattgatgagcataagggtagagggttatatagacttggttttacgtttcgattctaatgatgagagacttatttttgag
gacgcgttcatgattttcctaaaacagttgaacataaaatacacaacactcgaaaacgaaacggataagtccatattcaa
agctgcaaaaacaaaagccatgagagacaaagagttggcggacttttttcgtatattcacagctaaggtattcgacggag
gcttgaagccttttgttccagaagaacaacttaccatgcagaagatgagtctgactcgatatgaatttgctgacgtcctt
ggattgaaggcagattcagctttcattgatcacatgttcaaactggtcgacaaagatggtaatggcttcattgggttcca
agaattcatggattttttctttttgatgtcagaaggtgatgctaataagaaagcctctctcatctttaacatgtatgaca
atggaaacaaaggtcacctcacaaagaaagacttctcgtcaatgatcatgtcattaatggatttgtcagacaacagtaat
tcgttaacagagaaggagaggtcagaaatgatagataccatctatgatagtgcaggtctgaaaggcaaaaaggggatgga
cttaaagacattcaaagatatttttcttcataaagactactccctagttcttgatcaagccactctacccttagaagact
atacgaacgaacgtgagcatggtggactaaggcgcatagcgggatggggtgtgtctataacacgtggagctgccagtgtt
atgatgtttacctacacgagcctcatggtaaccatgtgtaggaacatcataactcacctcagagaatctatctttcacag
atttataccatttgactctgctcatctcttccataaatacattgcatccattgccattttgttcacagttgtgcattgtg
tgggacacgggtttaacttctaccacatttgtacacagccaccagcagatgtcagttgctattttagggaatacaaacga
tttactgatgttctacccaccttttcctactgggcgtttggcaccattacaggaatgacgggaattatactggtgtacat
tgttatatacatggttatcttcgctttaccgtacgcaagacgccatcttcataacatgtttaattttacccataagtttt
acatcctactgtacatcttcatgttcttgcacggagccgggcgacttgtacagccgccatattttcattatttcttcctt
ggacctgcccttgtattcatatttgacaaatcgcttacattaaggagacggaaacgtgaattgaaggtcctcaaaaccga
aattttgccatcagatgttctctccttgacgttcaagaaaccattagatttcaattacatttccggccaatgggtccgta
tcgcttgtccagctctcagcaggagtgagtaccacccctttaccttgacatcggcaccacacgaggacaccatctcatta
catataagagcagtagggccatggaccatgaatttaagatcaatttttgacaaggctaatacagctaattcaaaagttgt
tgaaccaaagttgtttttggatggtccctttggcgagggtcaccaggattggtacaagtatcctgtatccgtgttggtag
ggggagggattggtgtcacaccttttgcatccattctgaaggacattgtccataaagtgtctaattctaaaggttccttc
aactgcaaaaagatttatttcttatgggtaacccggacacagaaacaatttgagtggttcacagatataataagagaagt
ggagaagaaagataaacataatttggtcaatattcacatttttgtgactcagttcaaacatcagtacgatctacgtacaa
ccatgttgtatatatgtgaaagacatttccaaaaattggcgggaaaaagcttacttacaggactaaggtcgatcacccat
tttggcagaccgcgcttttatgacttctttaactccttgtcgagagagtaccctaaggaatcgaaaataggagtgttcag
ttgcggtccactaccaatgagtcttgctgtagaaaaggcgtgttcggatgtagcaaaattacaacaacgctcatcattta
ttcaccatcatgaaaatttctag

Protein
Protein IDpfu_aug2.0_773.1_11172.t1
Definition-
>pfu_aug2.0_773.1_11172.t1
MGYREGMRRIMLILERSKNQILVKDLLGQTLRIIDLVEENVVNILLSAAGKKRKLMSIRVEGYIDLVLRFDSNDERLIFE
DAFMIFLKQLNIKYTTLENETDKSIFKAAKTKAMRDKELADFFRIFTAKVFDGGLKPFVPEEQLTMQKMSLTRYEFADVL
GLKADSAFIDHMFKLVDKDGNGFIGFQEFMDFFFLMSEGDANKKASLIFNMYDNGNKGHLTKKDFSSMIMSLMDLSDNSN
SLTEKERSEMIDTIYDSAGLKGKKGMDLKTFKDIFLHKDYSLVLDQATLPLEDYTNEREHGGLRRIAGWGVSITRGAASV
MMFTYTSLMVTMCRNIITHLRESIFHRFIPFDSAHLFHKYIASIAILFTVVHCVGHGFNFYHICTQPPADVSCYFREYKR
FTDVLPTFSYWAFGTITGMTGIILVYIVIYMVIFALPYARRHLHNMFNFTHKFYILLYIFMFLHGAGRLVQPPYFHYFFL
GPALVFIFDKSLTLRRRKRELKVLKTEILPSDVLSLTFKKPLDFNYISGQWVRIACPALSRSEYHPFTLTSAPHEDTISL
HIRAVGPWTMNLRSIFDKANTANSKVVEPKLFLDGPFGEGHQDWYKYPVSVLVGGGIGVTPFASILKDIVHKVSNSKGSF
NCKKIYFLWVTRTQKQFEWFTDIIREVEKKDKHNLVNIHIFVTQFKHQYDLRTTMLYICERHFQKLAGKSLLTGLRSITH
FGRPRFYDFFNSLSREYPKESKIGVFSCGPLPMSLAVEKACSDVAKLQQRSSFIHHHENF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495