Gene
| Gene Model ID | pfu_aug2.0_774.1_14541 |
|---|---|
| Locus | scaffold774.1 : 60956 ... 75805 : + |
| To GenomeBrowser | scaffold774.1:60956..75805 |
| Genes list of scaffold | scaffold774.1 |
| Synonym | pfu_aug1.0_13354.1_39482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_774.1_14541.t1 | 1 | 1 | NB-ARC | 115 | 331 | 7.5e-15 | 54.5 | 8.8e-18 | 1.6e-14 | 53.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_774.1_14541.t1 | gi|260836659|ref|XP_002613323.1| | hypothetical protein BRAFLDRAFT_68290 [Branchiostoma floridae] | 2.0e-06 |
| pfu_aug2.0_774.1_14541.t1 | gi|672181376|ref|XP_008810904.1| | PREDICTED: putative disease resistance protein RGA3 [Phoenix dactylifera] | 2.0e-06 |
| pfu_aug2.0_774.1_14541.t1 | gi|743806665|ref|XP_010927750.1| | PREDICTED: putative disease resistance protein RGA3 [Elaeis guineensis] | 3.0e-06 |
| pfu_aug2.0_774.1_14541.t1 | gi|566224709|ref|XP_006370960.1| | hypothetical protein POPTR_0019s02160g [Populus trichocarpa] | 8.0e-06 |
| pfu_aug2.0_774.1_14541.t1 | gi|566258159|ref|XP_006388678.1| | hypothetical protein POPTR_0123s00230g [Populus trichocarpa] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_774.1_14541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14541.t1 atgatcaatgaactgtgcgcgttatagacggtcacaaaagaggatatttcaagtacagagaagacaactgaaatgcacag acatttgacttcaacagctaccattaaccggaaaatgagccttggaacgacatatgaatctcagaaaatgcctgaacaga aacctcttgtaggcaaaggccagccaggcagttacgatccggatgaccattatccttgcggatctattgaaaacaaagtt aatccagtggacatagatgactcattcattgaaaacgatacctcaagggccatcaaggaatcctttgagaaaggatgcaa agaatacgaaaatgggaaagggaaatcaattattattcatgggatgagaggatctgggaagacatgtattgctctgcatt gtctgagatcagttcaacagcaattctctattgttgaagcaagtaacgaaaaccatttacggaaatcgttgaaagatatt actgaagattgtttgttaaatgacgtcgatcatacagctgatctacataatatcatcaaggttatttctgaaaagttaat gaaaatgaaagttgttttactgatagatgatgtcataaattctcaaatgataaaactcatacacccgatgatcacaaaat gcacatgtatcataacaacgcataatgaaacaattgtccaaaagtgtccatcgttacaaagcttccatgtcaagggtgtt acttttgaggaggcaaagcaaatatttgaccagaacggtatgcaaagtttctactcagatgctaatttgagccaacttgt tgaagcgttagacggatcgccgtttggtataaaaagcgtaatttcctacatgaaggaaaagagtttgagtgtaaaatgca ttttgaagtacctttcccaccaagagggtgagtttcatgacaggacacctctatttagagtaatgagttaccatgttagc catatcaaatctgcatattcaaaggtttccactttggtattggccttgcaatttcttagatgcaatgatattccaatcta tttattttacgtattggcttcaaataaaaatgacaattgtccaccaaaagaaggaggtcatccttacaagaaaggagaaa ttctcacaaatgattttgtgggtgttttacggcgtatgtcattcgtcgatgtacaaggtctagatgacgaaaggaaaatc aatgtacctaaaattgtccagtatgctctttcgcagaataccgatgattcggacaaacaaatgctgtattttaaactttt aaagtgtatgtcatggttatttctcaaggatcatggccaccagcaggatcgccaaaggtgtcttgatttgctgcatcacg ctacagagctcctgacacaacgtaaatcgtcaactttcggcgacgccattgaagaggcattggtttatgtacaagtttgt gatcaagtgcggcacacctttgaagttctaggatatgaatcacaagaaaaatattatgcaaagcgcatgaaagaagtctt tctaagaaatattttaaagaaaggagaagaccggtttttggaagatgtcacaactaagtctgcagatgtcatgtcaaatg atatgataaaagccattgagcatattgtccacgagaaggagaaagtgataaccgaattagctgaagattatattcatttc aagattcggtcaaaatacgatattctacaaactttatccgtacgaacagtaggcattgaactcatcggtgtgaaggaatt aagattgagagatcatgtacaaggaactcctggagcaattgagaatttgcaagcatctatttgtgatgtagagcgtctga gatctgatagcagaaaatatttcaagtatggtttgtacgttatgtgcccgaaagaaaacgatgatctacagttacgttgc catgccacattactggagtaccacaaaacatgcaaggaacacgtgaaagcttctgaacaagcacagagacttgagaaact atttctggaaagatttgaagatctaaaggcagctccacattctcaaagagttaagcaagtcttggtcaattatctattgg aaaacgaggaattcgaacgtgcaaaatcaatactcacagcatgtcaacatcatataccatctcaaaccgtatctcagtac gactgtagagacattcttctactttttaagtgttatgaacgcttgaatcaatttgatgaaatgagaacactttggaacga ggttactttcaaatttccaagacatgctgacactgcaaagttaatcgaaaatcagattaaggaaattaaagacaaacacc tgagtgcagattgttag |
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Protein
| Protein ID | pfu_aug2.0_774.1_14541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14541.t1 MINELCALXTVTKEDISSTEKTTEMHRHLTSTATINRKMSLGTTYESQKMPEQKPLVGKGQPGSYDPDDHYPCGSIENKV NPVDIDDSFIENDTSRAIKESFEKGCKEYENGKGKSIIIHGMRGSGKTCIALHCLRSVQQQFSIVEASNENHLRKSLKDI TEDCLLNDVDHTADLHNIIKVISEKLMKMKVVLLIDDVINSQMIKLIHPMITKCTCIITTHNETIVQKCPSLQSFHVKGV TFEEAKQIFDQNGMQSFYSDANLSQLVEALDGSPFGIKSVISYMKEKSLSVKCILKYLSHQEGEFHDRTPLFRVMSYHVS HIKSAYSKVSTLVLALQFLRCNDIPIYLFYVLASNKNDNCPPKEGGHPYKKGEILTNDFVGVLRRMSFVDVQGLDDERKI NVPKIVQYALSQNTDDSDKQMLYFKLLKCMSWLFLKDHGHQQDRQRCLDLLHHATELLTQRKSSTFGDAIEEALVYVQVC DQVRHTFEVLGYESQEKYYAKRMKEVFLRNILKKGEDRFLEDVTTKSADVMSNDMIKAIEHIVHEKEKVITELAEDYIHF KIRSKYDILQTLSVRTVGIELIGVKELRLRDHVQGTPGAIENLQASICDVERLRSDSRKYFKYGLYVMCPKENDDLQLRC HATLLEYHKTCKEHVKASEQAQRLEKLFLERFEDLKAAPHSQRVKQVLVNYLLENEEFERAKSILTACQHHIPSQTVSQY DCRDILLLFKCYERLNQFDEMRTLWNEVTFKFPRHADTAKLIENQIKEIKDKHLSADC |
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