Gene
| Gene Model ID | pfu_aug2.0_774.1_14544 |
|---|---|
| Locus | scaffold774.1 : 96386 ... 115286 : + |
| To GenomeBrowser | scaffold774.1:96386..115286 |
| Genes list of scaffold | scaffold774.1 |
| Synonym | pfu_aug1.0_320.1_50798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_774.1_14544.t1 | 2 | 1 | FHA | 73 | 104 | 3.5e-18 | 65.4 | 4.2e-06 | 0.021 | 14.9 |
| pfu_aug2.0_774.1_14544.t1 | 2 | 2 | FHA | 121 | 192 | 3.5e-18 | 65.4 | 2.1e-16 | 1.0e-12 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_774.1_14544.t1 | gi|676470219|ref|XP_009058782.1| | hypothetical protein LOTGIDRAFT_164036 [Lottia gigantea] | 2.0e-35 |
| pfu_aug2.0_774.1_14544.t1 | gi|524909785|ref|XP_005109790.1| | PREDICTED: uncharacterized protein LOC101860531 [Aplysia californica] | 2.0e-18 |
| pfu_aug2.0_774.1_14544.t1 | gi|156403027|ref|XP_001639891.1| | predicted protein [Nematostella vectensis] | 4.0e-18 |
| pfu_aug2.0_774.1_14544.t1 | gi|524916866|ref|XP_005113201.1| | PREDICTED: flocculation protein FLO11-like isoform X1 [Aplysia californica] | 9.0e-18 |
| pfu_aug2.0_774.1_14544.t1 | gi|585687218|ref|XP_006820457.1| | PREDICTED: transcription factor 19-like [Saccoglossus kowalevskii] | 5.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_774.1_14544.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14544.t1 atgggttccgacgatgcagagtatattacatttggtatttcacagcctacctttggtgacataattaacaaattaagaag gatcaaagatctaaacagacttgcagacctaaacagacttgcagaccctaaacagacttgcagacctaaacagacgtgca gtccctttgcatgcttagctaatggtttccagatatggctgaaaaatggagttacaaggtttgggagggctacaaacaat gatttctacttggactccaccagactgaaaaacttcatttcccgtctacatgctgagattcactgcgaaattacagatgg cggtgagacggaattccgcttgctgaaaaatggagttacaaggtttgggagggctacaaacaatgatttctacttggact ccaccagactgaaaaacttcatttcccgtctacatgctgagattcactgcgaaattacagatggcggtgagacggaattc cgcttgtatgacaagggactcaatggaacatttgtaaatgatagaaagatgaatggcccccatgtgttggaggaagggga catagtaacctttggccacactaatggattcaagctaaaacctggggactatgccaaacaacctaattctgagttccagt ttgtttttgagcgaatcttggaaaaagaagaagaaaccggtgtaagaactggtgatattcctggagtgaacagtaactca cctcgaaacgacactgccaacacaaacggttaccaaagcaaccagttacctggcaacaggtccgaactaatcgcaaactc aaaatattcacttcaaaaggaaaaaactgaattgtacaacagtccatcaacgtcccctcgacggagaaatataagtgggc aaggaagtaagagtagttcaaaatcctcagcaacagaactttacgggagtgactcagacactcagaagggacatcagaaa ttgtttaaacgtagttcaccaacaaaaaacaatgactttcaacataacggtcctggatttcagaatttgtcggacttaaa tgacattgactcaggaaataaacgtattaatattgtccgcacttctccaaaggggaagaaaagaaaactgacagaaagta gtgaggagtccaaaccaagaggaagaaataatttgcaaagactgagtgaggacctggatgatctcccctctctgggtagc actagcagcaagtctaacgacagtgaagacgatagcctgaccatcgatccattcgcatttccatcagaagacacaagcac cgaaaccacgaagaagaaaaagagaggaccagcgaaaaagaaaactgggccagtccaacctaaagagaccaaaggtgtga aaaaacggaaaatagctgccggagcagtttcaaaaagtaatataaccaaaccagctccggaagcaaagaaaaagaaaggc aagggagttaaacgggggcgacgaaaacgctctgacagcagcaatgacgatgattctgacgaagaagcggaaaaatacga agatctagaagacggcgtggaatggtacgaggaagacaagtgctcggccctcgattgtaagagaccaaagcacaagagag ttgcatgggtaagttttattttcaagcatgggtacagtgtgatgattgtgaccagtggtatcatacagattgtgtcgggt gccgatacgagcatgtcaaggattctaacattaacttcagttgtggatgtcgataaaataacaacatttaagccagacac agcccctgcagctaaatccctagtgctaactcattga |
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Protein
| Protein ID | pfu_aug2.0_774.1_14544.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14544.t1 MGSDDAEYITFGISQPTFGDIINKLRRIKDLNRLADLNRLADPKQTCRPKQTCSPFACLANGFQIWLKNGVTRFGRATNN DFYLDSTRLKNFISRLHAEIHCEITDGGETEFRLLKNGVTRFGRATNNDFYLDSTRLKNFISRLHAEIHCEITDGGETEF RLYDKGLNGTFVNDRKMNGPHVLEEGDIVTFGHTNGFKLKPGDYAKQPNSEFQFVFERILEKEEETGVRTGDIPGVNSNS PRNDTANTNGYQSNQLPGNRSELIANSKYSLQKEKTELYNSPSTSPRRRNISGQGSKSSSKSSATELYGSDSDTQKGHQK LFKRSSPTKNNDFQHNGPGFQNLSDLNDIDSGNKRINIVRTSPKGKKRKLTESSEESKPRGRNNLQRLSEDLDDLPSLGS TSSKSNDSEDDSLTIDPFAFPSEDTSTETTKKKKRGPAKKKTGPVQPKETKGVKKRKIAAGAVSKSNITKPAPEAKKKKG KGVKRGRRKRSDSSNDDDSDEEAEKYEDLEDGVEWYEEDKCSALDCKRPKHKRVAWVSFIFKHGYSVMIVTSGIIQIVSG ADTSMSRILTLTSVVDVDKITTFKPDTAPAAKSLVLTH |
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