Gene
| Gene Model ID | pfu_aug2.0_774.1_14549 |
|---|---|
| Locus | scaffold774.1 : 158586 ... 196285 : + |
| To GenomeBrowser | scaffold774.1:158586..196285 |
| Genes list of scaffold | scaffold774.1 |
| Synonym | pfu_aug1.0_16638.1_18367 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 5 -amp-activated protein kinase subunit gamma-2 | GO:0004679 GO:0004862 GO:0005524 GO:0005615 GO:0005634 GO:0005737 GO:0005977 GO:0006110 GO:0006914 GO:0008603 GO:0008607 GO:0009267 GO:0010800 GO:0016208 GO:0019217 GO:0019901 GO:0030295 GO:0030730 GO:0031588 GO:0035556 GO:0042595 GO:0042632 GO:0043531 GO:0045787 GO:0045860 GO:0071901 GO:2001020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_774.1_14549.t1 | 4 | 1 | CBS | 322 | 374 | 8.0e-40 | 134.3 | 8.3e-08 | 0.0012 | 18.5 |
| pfu_aug2.0_774.1_14549.t1 | 4 | 2 | CBS | 405 | 453 | 8.0e-40 | 134.3 | 1.3e-13 | 1.9e-09 | 37.1 |
| pfu_aug2.0_774.1_14549.t1 | 4 | 3 | CBS | 480 | 525 | 8.0e-40 | 134.3 | 4.5e-10 | 6.7e-06 | 25.7 |
| pfu_aug2.0_774.1_14549.t1 | 4 | 4 | CBS | 555 | 602 | 8.0e-40 | 134.3 | 5.9e-17 | 8.7e-13 | 47.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_774.1_14549.t1 | gi|676478120|ref|XP_009061334.1| | hypothetical protein LOTGIDRAFT_193883 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_774.1_14549.t1 | gi|751787465|ref|XP_011203151.1| | PREDICTED: 5'-AMP-activated protein kinase subunit gamma-1 isoform X4 [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_774.1_14549.t1 | gi|751202576|ref|XP_011172641.1| | PREDICTED: 5'-AMP-activated protein kinase subunit gamma-1-like [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_774.1_14549.t1 | gi|161078467|ref|NP_001097854.1| | SNF4/AMP-activated protein kinase gamma subunit, isoform M [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_774.1_14549.t1 | gi|116008064|ref|NP_001036739.1| | SNF4/AMP-activated protein kinase gamma subunit, isoform I [Drosophila melanogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_774.1_14549.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14549.t1 atgtcaactctttatgtgaattttatgaaatctcgacttgagaaagtatgggcggacgataaagtacatagtgtggaaag tgttgaaaatggaattaatagtccggaccttggtgcctttgcgatgcccctcatggagccagatctgcgggacgcaacca acagcaacgaccttccggatggcgacttccggcctcgttctgggtccacgggacttcgtggattattctcagggaaatct cgccagcgtaaacaatcaggcgactcgaacgctaaaggggattcatctacttcttcgaaagaccttggtgcctttgcgat gcccctcatggagccagatctgcgggacgcaaccaacagcaacgaccttccggatggcgacttccggcctcgttctgggt ccacgggacttcgtggattattctcagggaaatctcgccagcgtaaacaatcaggcgactcgaacgctaaaggggattca tctacttcttcgaaagttaaaaatttctttgctgatgctttcagacctcgatcaaaatcagatttatcaggtgttaaacg gccgggcaaaaaacatagcaatcagatgaaaatggaccaatcaatggacgagaatcaattaagggactctttacaaaatg gacccacttccgggggacttcccccaggattacaaaaccacagagttgctcctcatggccattctacgccaatggggcaa attttagaaactcagttaacagtgccgaatgtgaacggaaaatcacgacatttatcgagtccccaagatagctttatgag tagatttcgagccaggtcgaattctgattccgtgaaaaatagacctcatcgaaaaattcataaacagcatagtataagtc caccaggcagcccttcgtatgagaacacggatcaggtctttgccaagtttatgcgtgcccacaaatgctacgacctcatt cctaccagtgccaaattagttatatttgatacccaactcaatgtgaaaaaagcattttttgcgctcgtttataacggagt aagagcggctcctttgtgggacagtgcacagcagaattatgtagggatgttaacgattacagactttattaacattctac ataagtattacaagtcacctctggttcaaatggatgaactagaggagcaaaaaatagctacgtggagagagttgttcaaa gagaagtaccgtcccttcgtttgtatagagccagacgccagtctatttgacgccattaaatgtctcatttccacacacgt tcaccgtttaccagtggtagatcggcacacaggcaacgccatctatgtactaacacataaacgcatactacgctttcttt atttatatattaaggacttgccaaaaccagggtttatgagtaaaaccataaaagaactcaatataggaacttatgaaaat ttagttacagctacaaccaatacacctctaataacggcactgaccaagtttgtggaaagtaggatctcggcattacctgt atgtgattcagagggcagggtcgttaacatatatgccaagtttgatgtaatcaatttggctgcagaaaaatcctataata atttagacataaccattgaacaggcccttaagcacagattacaggaggattggttcgaaggtgttgtcagatgtcgcccg gaggacaagctggaagctgtgatagataaactcgttaaagcagaggtccacaggctgattgtgatagacgaggaaaataa acctgtaggcattgtttcattgtcagacatactgaattacttagtgctcgaacctatgggtgaaggaatatccaaaaagt cctga |
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Protein
| Protein ID | pfu_aug2.0_774.1_14549.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_774.1_14549.t1 MSTLYVNFMKSRLEKVWADDKVHSVESVENGINSPDLGAFAMPLMEPDLRDATNSNDLPDGDFRPRSGSTGLRGLFSGKS RQRKQSGDSNAKGDSSTSSKDLGAFAMPLMEPDLRDATNSNDLPDGDFRPRSGSTGLRGLFSGKSRQRKQSGDSNAKGDS STSSKVKNFFADAFRPRSKSDLSGVKRPGKKHSNQMKMDQSMDENQLRDSLQNGPTSGGLPPGLQNHRVAPHGHSTPMGQ ILETQLTVPNVNGKSRHLSSPQDSFMSRFRARSNSDSVKNRPHRKIHKQHSISPPGSPSYENTDQVFAKFMRAHKCYDLI PTSAKLVIFDTQLNVKKAFFALVYNGVRAAPLWDSAQQNYVGMLTITDFINILHKYYKSPLVQMDELEEQKIATWRELFK EKYRPFVCIEPDASLFDAIKCLISTHVHRLPVVDRHTGNAIYVLTHKRILRFLYLYIKDLPKPGFMSKTIKELNIGTYEN LVTATTNTPLITALTKFVESRISALPVCDSEGRVVNIYAKFDVINLAAEKSYNNLDITIEQALKHRLQEDWFEGVVRCRP EDKLEAVIDKLVKAEVHRLIVIDEENKPVGIVSLSDILNYLVLEPMGEGISKKS |
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