Gene
| Gene Model ID | pfu_aug2.0_7762.1_09630 |
|---|---|
| Locus | scaffold7762.1 : 2795 ... 9555 : - |
| To GenomeBrowser | scaffold7762.1:2795..9555 |
| Genes list of scaffold | scaffold7762.1 |
| Synonym | pfu_aug1.0_30662.1_47988 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin isoform x1 | GO:0004871 GO:0005509 GO:0005513 GO:0005634 GO:0005819 GO:0005829 GO:0005886 GO:0005982 GO:0008016 GO:0009612 GO:0009909 GO:0019722 GO:0019899 GO:0030048 GO:0031982 GO:0035306 GO:0043234 GO:0051345 GO:0051645 GO:0051646 GO:0051924 GO:0060151 GO:0065008 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7762.1_09630.t1 | 2 | 1 | SPARC_Ca_bdg | 3 | 70 | 1.3e-07 | 31.6 | 6.9e-06 | 0.0074 | 16.3 |
| pfu_aug2.0_7762.1_09630.t1 | 3 | 1 | EF-hand_4 | 10 | 38 | 6.4e-06 | 25.8 | 0.034 | 36.0 | 4.1 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 1 | EF-hand_8 | 11 | 39 | 1.9e-19 | 69.0 | 1.9e-06 | 0.002 | 17.6 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 4.0e-29 | 97.6 | 1.0e-11 | 1.1e-08 | 33.7 |
| pfu_aug2.0_7762.1_09630.t1 | 5 | 1 | EF-hand_6 | 12 | 41 | 4.0e-22 | 76.0 | 2.3e-11 | 2.4e-08 | 33.1 |
| pfu_aug2.0_7762.1_09630.t1 | 2 | 1 | EF-hand_7 | 13 | 73 | 2.5e-29 | 101.2 | 7.6e-17 | 8.0e-14 | 51.5 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 1 | EF-hand_5 | 13 | 36 | 5.6e-19 | 66.5 | 4.4e-08 | 4.7e-05 | 22.5 |
| pfu_aug2.0_7762.1_09630.t1 | 2 | 1 | EF-hand_9 | 15 | 76 | 9.0e-12 | 44.7 | 4.6e-09 | 4.9e-06 | 26.3 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 2 | EF-hand_8 | 36 | 75 | 1.9e-19 | 69.0 | 4.9e-09 | 5.2e-06 | 25.9 |
| pfu_aug2.0_7762.1_09630.t1 | 5 | 2 | EF-hand_6 | 45 | 53 | 4.0e-22 | 76.0 | 5.8 | 6100.0 | -2.4 |
| pfu_aug2.0_7762.1_09630.t1 | 3 | 2 | EF-hand_4 | 47 | 75 | 6.4e-06 | 25.8 | 6.0e-05 | 0.064 | 12.9 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 2 | EF-hand_1 | 48 | 74 | 4.0e-29 | 97.6 | 2.1e-09 | 2.2e-06 | 26.5 |
| pfu_aug2.0_7762.1_09630.t1 | 5 | 3 | EF-hand_6 | 57 | 74 | 4.0e-22 | 76.0 | 4.3e-05 | 0.045 | 13.6 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 2 | EF-hand_5 | 57 | 69 | 5.6e-19 | 66.5 | 9.5e-05 | 0.1 | 12.0 |
| pfu_aug2.0_7762.1_09630.t1 | 2 | 2 | SPARC_Ca_bdg | 81 | 139 | 1.3e-07 | 31.6 | 4.1e-05 | 0.044 | 13.8 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 3 | EF-hand_1 | 86 | 114 | 4.0e-29 | 97.6 | 8.5e-10 | 9.0e-07 | 27.7 |
| pfu_aug2.0_7762.1_09630.t1 | 5 | 4 | EF-hand_6 | 86 | 115 | 4.0e-22 | 76.0 | 9.1e-10 | 9.6e-07 | 28.1 |
| pfu_aug2.0_7762.1_09630.t1 | 2 | 2 | EF-hand_7 | 87 | 140 | 2.5e-29 | 101.2 | 1.0e-16 | 1.1e-13 | 51.1 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 3 | EF-hand_8 | 89 | 111 | 1.9e-19 | 69.0 | 2.3e-05 | 0.025 | 14.1 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 3 | EF-hand_5 | 89 | 110 | 5.6e-19 | 66.5 | 1.0e-07 | 0.00011 | 21.3 |
| pfu_aug2.0_7762.1_09630.t1 | 2 | 2 | EF-hand_9 | 90 | 135 | 9.0e-12 | 44.7 | 5.1e-06 | 0.0054 | 16.6 |
| pfu_aug2.0_7762.1_09630.t1 | 3 | 3 | EF-hand_4 | 97 | 140 | 6.4e-06 | 25.8 | 0.00034 | 0.36 | 10.5 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 4 | EF-hand_8 | 98 | 140 | 1.9e-19 | 69.0 | 3.8e-10 | 4.0e-07 | 29.5 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 4 | EF-hand_1 | 122 | 140 | 4.0e-29 | 97.6 | 3.3e-07 | 0.00035 | 19.6 |
| pfu_aug2.0_7762.1_09630.t1 | 4 | 4 | EF-hand_5 | 124 | 139 | 5.6e-19 | 66.5 | 2.0e-05 | 0.021 | 14.1 |
| pfu_aug2.0_7762.1_09630.t1 | 5 | 5 | EF-hand_6 | 128 | 139 | 4.0e-22 | 76.0 | 0.0055 | 5.8 | 7.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7762.1_09630.t1 | gi|511828793|ref|XP_004739120.1| | 0.0 | |
| pfu_aug2.0_7762.1_09630.t1 | gi|597784687|ref|XP_007255845.1| | PREDICTED: calmodulin isoform X2 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_7762.1_09630.t1 | gi|511895955|ref|XP_004767578.1| | 0.0 | |
| pfu_aug2.0_7762.1_09630.t1 | gi|224118040|ref|XP_002317717.1| | calmodulin-like protein 6a [Populus trichocarpa] | 0.0 |
| pfu_aug2.0_7762.1_09630.t1 | gi|524990671|ref|XP_005043211.1| | PREDICTED: calmodulin isoform X1 [Ficedula albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7762.1_09630.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7762.1_09630.t1 atggaagagaagctaacagataagcagagagaagaaattaaagcggcctttgatttctttgacaaagatgggaatggagc tattgatgtgaatgaactcggtaatatgatgagaagtcttgggcagaatccgacagaggcagaacttaaggatatgatag caaatcaagatgtaaacagaaatggtactattgattacgatgaattcattatcatgatggaagaaaattacaaagacata agtaccgtagaagctgaacttttggcggcctttagagtgttcgatatggaccacaatggatatatagaaagctcggagct caggaaagtactcaaagatctcggagaacaattatcggagcaggaagtagaaaaaatcattcaagactacgatttggatg gagatggaaaaattaattatgttggtaaggacaattga |
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Protein
| Protein ID | pfu_aug2.0_7762.1_09630.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7762.1_09630.t1 MEEKLTDKQREEIKAAFDFFDKDGNGAIDVNELGNMMRSLGQNPTEAELKDMIANQDVNRNGTIDYDEFIIMMEENYKDI STVEAELLAAFRVFDMDHNGYIESSELRKVLKDLGEQLSEQEVEKIIQDYDLDGDGKINYVGKDN |
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