Gene
| Gene Model ID | pfu_aug2.0_7771.1_06309 |
|---|---|
| Locus | scaffold7771.1 : 7906 ... 9145 : - |
| To GenomeBrowser | scaffold7771.1:7906..9145 |
| Genes list of scaffold | scaffold7771.1 |
| Synonym | pfu_aug1.0_5630.1_09175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7771.1_06309.t1 | 5 | 1 | NHL | 87 | 101 | 4.7e-07 | 29.4 | 0.027 | 200.0 | 2.2 |
| pfu_aug2.0_7771.1_06309.t1 | 5 | 2 | NHL | 124 | 144 | 4.7e-07 | 29.4 | 0.0019 | 14.0 | 5.8 |
| pfu_aug2.0_7771.1_06309.t1 | 5 | 3 | NHL | 197 | 204 | 4.7e-07 | 29.4 | 0.45 | 3300.0 | -1.7 |
| pfu_aug2.0_7771.1_06309.t1 | 5 | 4 | NHL | 226 | 243 | 4.7e-07 | 29.4 | 4.0e-05 | 0.29 | 11.1 |
| pfu_aug2.0_7771.1_06309.t1 | 5 | 5 | NHL | 264 | 283 | 4.7e-07 | 29.4 | 1.2e-07 | 0.00088 | 19.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7771.1_06309.t1 | gi|260825373|ref|XP_002607641.1| | hypothetical protein BRAFLDRAFT_84670 [Branchiostoma floridae] | 1.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_7771.1_06309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7771.1_06309.t1 atgaaaaagccagttggaattattcagttcaaagagataaggaaagatgaaattaagagcagaaacatcactaatatcag atctgtacatgtacaaaaaaggacttcatttaaaagtaagacaggcgtcacatccatgaccacagcaggtaacaacatgg cctgggttatagaatacagaagtcctaccatgtatctgtataacgatgagggtaacgtagttaggtctgtgacagtgata ggttgtgacggcatcaatgacatgtcaatcacacagtcaggggagattatagttacatgtgaagacaggaaagtgaggca tgtatcagtgagtggtgaggtgtctacactgatagatactgtgccattatactgtggtggtgtgtgtctgaatgacaaag aagagattgtagtgtgtatgagaggtcagtgtgataagaaccatgtggctgtgtactcatctgatggacgtagtaagcaa cgtgagatacgaggtagggacggtaaggggaaacacgttgttactgatccttaccgcgtggcaaagaatggccaggatct gtgtatagttacttttaataagcatgtggtttgtgtagacgagagagataatgtgaggtgggtgtatgacggtaaggaag ctaaactaggcaattcatttggttcatgttgtatgtgtgttgatcggtacaagaacgtgctggtcactgatactgataac cactgtgtacattatatagacagggagggaggactgatacagatgataatgacacaggaacaaataggattacagtatcc ttgggggatctgtgtagatgacgtaacaggacatgtctgggttgggaatgctttgagggatgtcgtcattgctaaatact tggaataa |
|
Protein
| Protein ID | pfu_aug2.0_7771.1_06309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7771.1_06309.t1 MKKPVGIIQFKEIRKDEIKSRNITNIRSVHVQKRTSFKSKTGVTSMTTAGNNMAWVIEYRSPTMYLYNDEGNVVRSVTVI GCDGINDMSITQSGEIIVTCEDRKVRHVSVSGEVSTLIDTVPLYCGGVCLNDKEEIVVCMRGQCDKNHVAVYSSDGRSKQ REIRGRDGKGKHVVTDPYRVAKNGQDLCIVTFNKHVVCVDERDNVRWVYDGKEAKLGNSFGSCCMCVDRYKNVLVTDTDN HCVHYIDREGGLIQMIMTQEQIGLQYPWGICVDDVTGHVWVGNALRDVVIAKYLE |
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