Gene
| Gene Model ID | pfu_aug2.0_7790.1_02933 |
|---|---|
| Locus | scaffold7790.1 : 1 ... 12603 : + |
| To GenomeBrowser | scaffold7790.1:1..12603 |
| Genes list of scaffold | scaffold7790.1 |
| Synonym | pfu_aug1.0_1823.1_58662 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear respiratory factor 1 isoform x2 | GO:0000977 GO:0000989 GO:0001228 GO:0005634 GO:0006357 GO:0006950 GO:0006996 GO:0044710 GO:0044763 GO:0048513 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7790.1_02933.t1 | 1 | 1 | Nrf1_DNA-bind | 21 | 106 | 3.59994e-41 | 140.6 | 4.2039e-45 | 6.79994e-41 | 139.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7790.1_02933.t1 | gi|602671783|ref|XP_007441402.1| | PREDICTED: nuclear respiratory factor 1-like [Python bivittatus] | 0.0 |
| pfu_aug2.0_7790.1_02933.t1 | gi|512830882|ref|XP_004913112.1| | PREDICTED: nuclear respiratory factor 1 isoform X2 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7790.1_02933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7790.1_02933.t1 ctcgccgggacgaaaagtccggagagcttatgccataccctcagcgtcgttgtcgtcgttgtcatcgtcgtcgcacagtt gcggacattcatccctgaaatgttaaagttttcaacaaacagaagtaagccaggttggggtaaagcggagtttaaaccag tatggtggccagacagtgtaccttgggctaacgttagaagtgatgtcagaacaccacaacagaaaaaggaggtatcttgg acagaggctttacggaccatagtttaccattgctacaagcatcatggcagagaagatcttttacacgcctttgagggcca ggagcagagttctgccgctcagtcaagaacgatgttccagactataaataaccctgacggaactgtctcaatcatacaaa tagaaacggcccctaaccaggtggtaacactaccagatggtacccaggctactgttgtacatacgatacaagatggaata cctctacatgaagctaatcaagcagttaaaactctagcagacgttgcctccaatcagcaagaggccagcactctacaaat gacgcccgtcagtgttgaaatgaactcggatacggttaggcataatattgcaacaatctcagaggaaggacatattgtac tcacaggagacgatctaggaactacatcaggtatcatgataccagtctcagtatatcaacctttgtcacagccaaacatg acgtatacaaatttacagacacaaggagataatttacaggttgctatggcaccaatcaccatggaaaccaagcaagaaac aacagaaaatagtgagcaaggggaacttaacgatcaaaatcaggac |
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Protein
| Protein ID | pfu_aug2.0_7790.1_02933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7790.1_02933.t1 LAGTKSPESLCHTLSVVVVVVIVVAQLRTFIPEMLKFSTNRSKPGWGKAEFKPVWWPDSVPWANVRSDVRTPQQKKEVSW TEALRTIVYHCYKHHGREDLLHAFEGQEQSSAAQSRTMFQTINNPDGTVSIIQIETAPNQVVTLPDGTQATVVHTIQDGI PLHEANQAVKTLADVASNQQEASTLQMTPVSVEMNSDTVRHNIATISEEGHIVLTGDDLGTTSGIMIPVSVYQPLSQPNM TYTNLQTQGDNLQVAMAPITMETKQETTENSEQGELNDQNQD |
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