Gene
| Gene Model ID | pfu_aug2.0_78.1_26806 |
|---|---|
| Locus | scaffold78.1 : 200009 ... 239261 : - |
| To GenomeBrowser | scaffold78.1:200009..239261 |
| Genes list of scaffold | scaffold78.1 |
| Synonym | pfu_aug1.0_4534.1_01757 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_78.1_26806.t1 | 1 | 1 | CPSase_sm_chain | 1 | 107 | 7.2e-35 | 119.3 | 2.3e-37 | 1.8e-34 | 118.0 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | GATase | 148 | 299 | 7.5e-36 | 123.3 | 2.7e-38 | 2.1e-35 | 121.9 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | MGS | 286 | 319 | 1.6e-18 | 66.3 | 9.4 | 7300.0 | -3.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | CPSase_L_chain | 302 | 392 | 9.0e-35 | 119.1 | 2.8e-16 | 2.2e-13 | 50.2 |
| pfu_aug2.0_78.1_26806.t1 | 4 | 1 | ATPgrasp_Ter | 341 | 447 | 6.9e-20 | 71.0 | 0.011 | 8.2 | 5.0 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | CPSase_L_D2 | 397 | 600 | 0.0 | 378.4 | 0.0 | 0.0 | 275.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | ATP-grasp_3 | 401 | 571 | 3.5e-11 | 43.2 | 1.6e-05 | 0.013 | 15.4 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | ATP-grasp | 411 | 565 | 2.4e-16 | 59.5 | 3.9e-06 | 0.0031 | 16.9 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | ATP-grasp_4 | 412 | 573 | 4.8e-32 | 111.1 | 3.5e-11 | 2.8e-08 | 33.7 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | RimK | 416 | 473 | 1.5e-08 | 34.3 | 0.07 | 55.0 | 3.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | Dala_Dala_lig_C | 418 | 568 | 4.5e-17 | 62.1 | 1.5e-09 | 1.2e-06 | 28.0 |
| pfu_aug2.0_78.1_26806.t1 | 4 | 2 | ATPgrasp_Ter | 532 | 601 | 6.9e-20 | 71.0 | 2.2e-07 | 0.00017 | 20.4 |
| pfu_aug2.0_78.1_26806.t1 | 1 | 1 | CPSase_L_D3 | 687 | 811 | 7.2e-39 | 132.3 | 2.59997e-41 | 2.1e-38 | 130.8 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | CPSase_L_chain | 825 | 932 | 9.0e-35 | 119.1 | 4.0e-21 | 3.1e-18 | 65.8 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | GATase | 887 | 911 | 7.5e-36 | 123.3 | 9.4 | 7300.0 | -3.8 |
| pfu_aug2.0_78.1_26806.t1 | 4 | 3 | ATPgrasp_Ter | 922 | 1138 | 6.9e-20 | 71.0 | 2.6e-13 | 2.1e-10 | 39.9 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | ATP-grasp_3 | 935 | 1109 | 3.5e-11 | 43.2 | 1.2e-08 | 9.4e-06 | 25.5 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | RimK | 935 | 1109 | 1.5e-08 | 34.3 | 1.6e-09 | 1.2e-06 | 28.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | ATP-grasp_4 | 936 | 1111 | 4.8e-32 | 111.1 | 6.8e-24 | 5.3e-21 | 75.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | CPSase_L_D2 | 939 | 1138 | 0.0 | 378.4 | 6.1e-32 | 4.8e-29 | 101.1 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | ATP-grasp | 946 | 1109 | 2.4e-16 | 59.5 | 4.0e-13 | 3.1e-10 | 39.6 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | Dala_Dala_lig_C | 950 | 1106 | 4.5e-17 | 62.1 | 1.3e-10 | 1.0e-07 | 31.5 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | MGS | 1218 | 1320 | 1.6e-18 | 66.3 | 1.1e-20 | 8.2e-18 | 64.1 |
| pfu_aug2.0_78.1_26806.t1 | 4 | 4 | ATPgrasp_Ter | 1328 | 1394 | 6.9e-20 | 71.0 | 0.92 | 710.0 | -1.4 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | Amidohydro_4 | 1356 | 1407 | 5.8e-17 | 62.6 | 8.2e-10 | 6.4e-07 | 29.6 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 1 | Amidohydro_1 | 1356 | 1406 | 5.5e-07 | 29.5 | 1.2e-09 | 9.0e-07 | 28.8 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | Amidohydro_4 | 1469 | 1635 | 5.8e-17 | 62.6 | 5.0e-10 | 3.9e-07 | 30.3 |
| pfu_aug2.0_78.1_26806.t1 | 2 | 2 | Amidohydro_1 | 1476 | 1533 | 5.5e-07 | 29.5 | 3.0 | 2300.0 | -2.1 |
| pfu_aug2.0_78.1_26806.t1 | 1 | 1 | OTCace_N | 1797 | 1939 | 2.8026e-43 | 146.9 | 1.4013e-45 | 5.89947e-43 | 145.9 |
| pfu_aug2.0_78.1_26806.t1 | 1 | 1 | OTCace | 1957 | 2042 | 1.3e-13 | 51.1 | 6.7e-16 | 5.2e-13 | 49.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_78.1_26806.t1 | gi|658910998|ref|XP_008395571.1| | PREDICTED: CAD protein [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_78.1_26806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_78.1_26806.t1 atggttggctacccagagtccatgacggacccctcctacagaaaacagatccttatcctgacgtaccccctcatagggaa ttatgggatacctgataataaaaccgacaaatacggcctccaggaatggtttgaatcggcagaaattcacacggcaggac ttataatcggggatctgtcggaaaatcatagtcactggagctctgtcaagtctctctctgattggctacaggaatatgac atcccagccttgtatgggttggatacaagggctctaacgaagaaaatcagagaaaatggcacaatgctgggaaagattgt ggttgatgagacagaccctcaaagcattccacttactgatcccaacaagctgcatctggtggcagaagtgtccatcaaga ctcctgtacaatataacaagaatgccgacataaagatcgtggcagtggattgtgggataaagtacaatcagatacgatgc ttatgtgagagaggagcatcggttaccgtggtaccctgggattatccaatcaaatcctctgaatacgatggattgttcat cagtaacggaccaggagatcctgagatgtgtgacaaaacgataaaaaatttacgtagcataatcaacgagtctgaaccca aacctgtattcggcatctgtctgggtcatcagcttctgtcactggcggttggagctaaaacttacaagatgaagtatggt aaccgaggacacaatcaaccctgtcgctacaatggaacgatccgttgttatattaccacacagaaccatggcttcgctgt ggatgctaccactctaccagaggggtggtcaccattgttcaccaatgaaaatgacaaaactaacgaaggcattgtccacg aagtgaaacctttcttcaggtttgcaatcaaagctctgaaggaagagggaatacagacgatactcataaatcctaacata gcgacagtacagacatcaaaaggattggctgataaagtcttctttctgccaattacgttagaatacgtcacacagatcat cagaagtgagaggcctaacggtatactactgacattcggtggtcaaacagcattgaactgtggagttcagctaacgaaga caggcgtgttagagaagttcaatgtccgagtgctcggaactcaggtcaggtcgatagaatggacggaggatcggaaggtg tttgccgacaaaatgttagagatcaacgaacacgtggcacctagtgaggctgcctacacagtggaacaggcagttgctgc tgcagaaaggctaggctatcctgtacttatcagagcggctttcgctttaggcgggcttgggtccggttttgctgacaatc gggaacagttacttaccctcgttaacggagcgttcgcccacactagccaggtcctgatagacaagtcattgaaaggttgg aaggaagtggagtatgaagtgatcagagatgcctatgataactgtattacggtgtgtaacatggagaatgtagatccact aggaatccacacaggagagtcgattgtcgtagctccgagccaaaccctgactaacgtagagtataacatgctacgagcca cagccattaaggtcatacgtcaccttggagtggtgggggaatgtaacatacaatacgccctcaaccctgaatctcacgag tactacatcattgaagtgaacgccagattatcacgaagttcagccttagctagtaaagctactgggtatcccctggccta cgtagcggctaaactagcactggggattccccttcccgaactcagaaactctgtcaccacctccaaggaaaactctacta ctgcgtgcttcgagccaagccttgattactgtgtggtcaaaatacctcgctgggatttgaagaagttctctagagtttct acgaagatagggagttccatgaagagtgtaggagaggtgatggccattggcaggaagtttgaggaggcgtttcagaaagc tcttcgtatgatggacgaaaatatagtaggatttgatccctacacagcggaagtttccgaggaggaattacgtgacccga ctgatcgtagaatgtttgtgttggcccgagcgttgaaggaaggatacagtatagataagctgtacgaacttactaagatc gacagatggttcctacacaagttcaagaacataacggatcatctgtctgcgttggaagtatttagagggaagatgggtca ggttgcgacagaaatgttgataaaggccaaacaactaggattttgtgacgaacaaatagccagggctgtagaaagcacac atttagtagtacgcaaggttcgatacaagctcggaatctgtccccacatcaaacagatagatacagtagcagcagaatgg ccggcccagacaaactatttatacctgacgtacaacggagacacggacgatttaacattcccaggcggctatgtcatggt cattgggtcaggagtgtacaggataggaagtagtgtagaatttgattggtgtgcggtcaagtgtatcacagaactcagaa aaatgggttacaagacaataatggtgaactataaccctgagacagtcagtacagattatgatatgtgcgacagactttac ttcgatgaaatctcatttgagaccgtgatggacatctacaatttggagaaaccagatggcgttatattatctatgggcgg acaactccctaataacattgccatgcagcttcacagacaacaggccaaagtattggggacatcaccagagtgtattgatt cggcagaaaatcgcttcaagttttcccgtatgctcgacaatatgaacatagaacagccaaggtggaaggaactctcagat gtggagacagccaaagagttctgtgaggaggttgggtacccttgtcttgtacggccatcctatgtactcagtggggctgc catgaacgtagctcacagtcaccaggatctggaggactatctgaaccaggccagcgccgtgtccaaggaatgtccagtcg ttatatctaaatttatcctggaggccaaggaaattgacgtagatgttgtggcgagtgatggggaggtgttatgtatggcc gtatcggagcatatagagaatgccggggtacactcaggagacgctagtcttgtgaccccaccccaggatcttaacgagga gacgctggccaaaattagggctatttgttgtgccatagggagagcgttagaagttaccggtccattcaatttgcagctta ttgctaaggacaatcagctgaaagtcattgagtgcaatgtcagagtgtcaaggtcattcccatttgtatccaaaacccta ggtcatgatttcattgccatggcaaccagagtcatcatgggagaagacttggatcctataaacgtactgaatggttgtgg tagagtgggagtcaaggtgccggtattttctttctcccgtttacaaggtgcggatgtacttctcggagtggagatggcca gtacgggagaagtggcatgcttcggcgagaatcgatatgaggcgtacctcaaggcacaacttagcactggattcaaaata cccaaaaagaacatactcatctctataggtagcttcaagcacaagaatgagttattatctggtatgagggcgttacagaa tctaggatataatctgtatgctagcatgggaacagccgacttctacaacgaacatggcctgaacataaagcctgttgatt ggccgtacgaggacacaggggaaagtaaacgtaatggtgtagagcagcacacaatagccaactatctgtctgagaatatg ttcgatttggtgataaatctgccactgaggaattctgggacgtatcgagcctcaacatttatgacgcagggctacaagac acggcgaatggctgtggattactccgtccctttgataacggacgttaagtgtactaagatgctgatagaggccctgagaa tgatgaagggttcccctcccttaaagatgcacgtggactgtatatcatcacatagggttgttagactaccaggtcttata gatgtccatgtacatgtacgagagccaggggccacccataaagaagactggggtagtgccactgccgccgcactagctgg tggcatcactatgatcctagcgatgcccaacactaaccccccaactgtggatgatgctgcactaacactaacacaaaaat tggccagacttggtgcacggtgtgactatggtattttcctcggtgctagcagtacaaactaccagactcttcctcagatt gccagtaaggcctgcgctctcaaaatgtacctgaacgagacattcaccactctgaaactggacgatctctcagtatggat gaagcattttgaatactggccaaagaacatcccaatatgcgcccatgccgagggtacgcacacggcagccataatactga tgtgtcaactttataaacgatcactccacgtctgtcatgtagccaggaaagaggagattctggtcatcaaagcagccaag gagagaggcctctctgtaacctgcgaggtggctccacatcacttattcctgacctcagaggacctcgagaaaataggtca catgaggggtcaggtcaaacctcctctggtcttgaaagaagatcaagatgcattgtgggaaaatatggatatcatagact gcttcgctactgaccatgctccccatgctgtagaggagaagaacagtgacaaaccccctccaggattcccgggactagag accatgttacctatgttactgacagcagtgtatgatgggcggttaacactggacgacatcatactacgtcttcacaccaa cccaaggaggatctttaacctaccagaacagcccgacacgtacatagaggtggacttagaacaccagtggaccatccctg attatatgccgttcacaaagtcaaagtggacgccatttgccgggaagagtgtagtggggaaggtggtgagggtggtgctt agaggggaagtggcatatatagaaaacgaggtactagtacagaaaggctacggtacagacattaagtcttacccaaccca aggtaccgtacatgtgggtagtggcgaccagctccaagtccagataccgacggtaacgtactccggtacctcacaaccgt catccgaaccgtccagtcctaggaaagtatctgaccgcaaggccaaggtcataggggaaccaatgtatgaaagagaacta caaacagccgactacctaaggagggaccatggtctgatcacgcccccacaggccggattgatccacccctcagggatcac attgtttgcccatggtgtctccggccatcatgttttgtctgtacagaacttcagcaaagatcagcttcaccaactattca atgtagctcatcagttaaggttagccgttctcagagacagacccctagattatatactgaagggtaaagtgatggggtcg ctgtttttcgaggtgagcacacgtaccagttgttctttctctgcggccatgcagcgtctgggaggctctgtgattagcct tgattctggttcatcttcgctacagaaaggagagtctttacatgacactgtacagaccatggcaggatactcggatgtat tagtgattcgtcacccttcccctggagttgttactacggctgccagtagatgtcgaaagcctgtgattaacgctggggac ggaatcggtgaacacccgacacaggccctgctagatgtgtttactatacgtgaggaaatcggtacagtgaatggactaac ggtaaaattcttcatcttaatgtcacctattacaatggttggagaccttaagaatggccgtaccgtacactcgttggctc gtctccttacccattaccgagtaaagctgtgctacgtatccccaccgtccctgaaaatgccggacgatgtcaaacagtac gttacggagaaggaaattcgacaggaggaactcacccaacttgaagacatactccccgagactgatgtactgtacatgac tagaattcagaaagaacgatttacatccgaggatgaatataataagaaaaaattggattttctaacgattttatcatttt aa |
|
Protein
| Protein ID | pfu_aug2.0_78.1_26806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_78.1_26806.t1 MVGYPESMTDPSYRKQILILTYPLIGNYGIPDNKTDKYGLQEWFESAEIHTAGLIIGDLSENHSHWSSVKSLSDWLQEYD IPALYGLDTRALTKKIRENGTMLGKIVVDETDPQSIPLTDPNKLHLVAEVSIKTPVQYNKNADIKIVAVDCGIKYNQIRC LCERGASVTVVPWDYPIKSSEYDGLFISNGPGDPEMCDKTIKNLRSIINESEPKPVFGICLGHQLLSLAVGAKTYKMKYG NRGHNQPCRYNGTIRCYITTQNHGFAVDATTLPEGWSPLFTNENDKTNEGIVHEVKPFFRFAIKALKEEGIQTILINPNI ATVQTSKGLADKVFFLPITLEYVTQIIRSERPNGILLTFGGQTALNCGVQLTKTGVLEKFNVRVLGTQVRSIEWTEDRKV FADKMLEINEHVAPSEAAYTVEQAVAAAERLGYPVLIRAAFALGGLGSGFADNREQLLTLVNGAFAHTSQVLIDKSLKGW KEVEYEVIRDAYDNCITVCNMENVDPLGIHTGESIVVAPSQTLTNVEYNMLRATAIKVIRHLGVVGECNIQYALNPESHE YYIIEVNARLSRSSALASKATGYPLAYVAAKLALGIPLPELRNSVTTSKENSTTACFEPSLDYCVVKIPRWDLKKFSRVS TKIGSSMKSVGEVMAIGRKFEEAFQKALRMMDENIVGFDPYTAEVSEEELRDPTDRRMFVLARALKEGYSIDKLYELTKI DRWFLHKFKNITDHLSALEVFRGKMGQVATEMLIKAKQLGFCDEQIARAVESTHLVVRKVRYKLGICPHIKQIDTVAAEW PAQTNYLYLTYNGDTDDLTFPGGYVMVIGSGVYRIGSSVEFDWCAVKCITELRKMGYKTIMVNYNPETVSTDYDMCDRLY FDEISFETVMDIYNLEKPDGVILSMGGQLPNNIAMQLHRQQAKVLGTSPECIDSAENRFKFSRMLDNMNIEQPRWKELSD VETAKEFCEEVGYPCLVRPSYVLSGAAMNVAHSHQDLEDYLNQASAVSKECPVVISKFILEAKEIDVDVVASDGEVLCMA VSEHIENAGVHSGDASLVTPPQDLNEETLAKIRAICCAIGRALEVTGPFNLQLIAKDNQLKVIECNVRVSRSFPFVSKTL GHDFIAMATRVIMGEDLDPINVLNGCGRVGVKVPVFSFSRLQGADVLLGVEMASTGEVACFGENRYEAYLKAQLSTGFKI PKKNILISIGSFKHKNELLSGMRALQNLGYNLYASMGTADFYNEHGLNIKPVDWPYEDTGESKRNGVEQHTIANYLSENM FDLVINLPLRNSGTYRASTFMTQGYKTRRMAVDYSVPLITDVKCTKMLIEALRMMKGSPPLKMHVDCISSHRVVRLPGLI DVHVHVREPGATHKEDWGSATAAALAGGITMILAMPNTNPPTVDDAALTLTQKLARLGARCDYGIFLGASSTNYQTLPQI ASKACALKMYLNETFTTLKLDDLSVWMKHFEYWPKNIPICAHAEGTHTAAIILMCQLYKRSLHVCHVARKEEILVIKAAK ERGLSVTCEVAPHHLFLTSEDLEKIGHMRGQVKPPLVLKEDQDALWENMDIIDCFATDHAPHAVEEKNSDKPPPGFPGLE TMLPMLLTAVYDGRLTLDDIILRLHTNPRRIFNLPEQPDTYIEVDLEHQWTIPDYMPFTKSKWTPFAGKSVVGKVVRVVL RGEVAYIENEVLVQKGYGTDIKSYPTQGTVHVGSGDQLQVQIPTVTYSGTSQPSSEPSSPRKVSDRKAKVIGEPMYEREL QTADYLRRDHGLITPPQAGLIHPSGITLFAHGVSGHHVLSVQNFSKDQLHQLFNVAHQLRLAVLRDRPLDYILKGKVMGS LFFEVSTRTSCSFSAAMQRLGGSVISLDSGSSSLQKGESLHDTVQTMAGYSDVLVIRHPSPGVVTTAASRCRKPVINAGD GIGEHPTQALLDVFTIREEIGTVNGLTVKFFILMSPITMVGDLKNGRTVHSLARLLTHYRVKLCYVSPPSLKMPDDVKQY VTEKEIRQEELTQLEDILPETDVLYMTRIQKERFTSEDEYNKKKLDFLTILSF |
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