Gene
| Gene Model ID | pfu_aug2.0_78.1_26813 |
|---|---|
| Locus | scaffold78.1 : 419066 ... 441841 : - |
| To GenomeBrowser | scaffold78.1:419066..441841 |
| Genes list of scaffold | scaffold78.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_78.1_26813.t1 | 1 | 1 | RPE65 | 66 | 324 | 0.0 | 172.2 | 0.0 | 0.0 | 171.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_78.1_26813.t1 | gi|551514101|ref|XP_005808562.1| | PREDICTED: beta,beta-carotene 9',10'-oxygenase-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_78.1_26813.t1 | gi|617364183|ref|XP_007565344.1| | PREDICTED: beta,beta-carotene 9',10'-oxygenase-like [Poecilia formosa] | 0.0 |
| pfu_aug2.0_78.1_26813.t1 | gi|617364179|ref|XP_007565330.1| | PREDICTED: beta,beta-carotene 9',10'-oxygenase-like [Poecilia formosa] | 0.0 |
| pfu_aug2.0_78.1_26813.t1 | gi|637370040|ref|XP_008121888.1| | PREDICTED: beta,beta-carotene 9',10'-oxygenase [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_78.1_26813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_78.1_26813.t1 atggaatgcagccctggtgaaggacacgggaacgattttacttatgtcgtcatgtctgcatcagttacacatttcgagag aactgatgatattgttatcaatgaggacatcaatttcgagggtcttcttttgtcagaggcaattctaaaaggtttaaaat ttgcagacaaagaagattccttcaaaaacatccgcatagccggagagacgcagtgtcgctggcgatttcatcctggttac atacacagcttcaatctaacagagaattacttcgtctaccctgaacaaacatttgcctggagtataccaatgttagcctc tatgccattccataataagtctgctatggacaatttccaatggtaccccaacgaaaagactcttttcaaaatcattgaca gaatatccggagtgcctctaagtataaaatacacaagtgaggctcagttcaccttccaccatataaacgcttacgaggag gacggccatttggtgctagacatgtctgcatacaaagacgcggagatcatcaaaaatctatacctggaaaattacacaga ggaaaagataagtcaaaccatggagaaagaaaaattgttcggggaagttagacgatttgtgttccctctgaacgttgacg ataagacccctgaaaatgagaacctggtgaggttaacaggatgtaaggctacagcgaagaaaatctccaaagatgaagtg tactgtgaatatgaagtcctatattcaggcggttgtgagttggcccaggttaactatccaaagtacaacggaaggaagta cacctacgtgtatggagtgggacatggatttaagagactcgtaaagctgaatgtgactgacaagacgtacaaaatatggg agcctacagaaggtatcgtgtcggagccagtgtttgtacccaacccagatcagaaatcagaagatgatggtacggttatg atatacatgtacatgtatctatga |
|
Protein
| Protein ID | pfu_aug2.0_78.1_26813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_78.1_26813.t1 MECSPGEGHGNDFTYVVMSASVTHFERTDDIVINEDINFEGLLLSEAILKGLKFADKEDSFKNIRIAGETQCRWRFHPGY IHSFNLTENYFVYPEQTFAWSIPMLASMPFHNKSAMDNFQWYPNEKTLFKIIDRISGVPLSIKYTSEAQFTFHHINAYEE DGHLVLDMSAYKDAEIIKNLYLENYTEEKISQTMEKEKLFGEVRRFVFPLNVDDKTPENENLVRLTGCKATAKKISKDEV YCEYEVLYSGGCELAQVNYPKYNGRKYTYVYGVGHGFKRLVKLNVTDKTYKIWEPTEGIVSEPVFVPNPDQKSEDDGTVM IYMYMYL |
|