Gene
| Gene Model ID | pfu_aug2.0_7804.1_16293 |
|---|---|
| Locus | scaffold7804.1 : 6124 ... 9565 : - |
| To GenomeBrowser | scaffold7804.1:6124..9565 |
| Genes list of scaffold | scaffold7804.1 |
| Synonym | pfu_aug1.0_2739.1_59020 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7804.1_16293.t1 | 1 | 1 | Dimer_Tnp_hAT | 196 | 244 | 1.7e-07 | 30.7 | 3.6e-11 | 5.3e-07 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7804.1_16293.t1 | gi|542202936|ref|XP_005475361.1| | PREDICTED: zinc finger BED domain-containing protein 1-like [Oreochromis niloticus] | 5.0e-29 |
| pfu_aug2.0_7804.1_16293.t1 | gi|554880741|ref|XP_005950147.1| | PREDICTED: zinc finger BED domain-containing protein 1-like [Haplochromis burtoni] | 2.0e-18 |
| pfu_aug2.0_7804.1_16293.t1 | gi|554832128|ref|XP_005926618.1| | PREDICTED: zinc finger BED domain-containing protein 1-like [Haplochromis burtoni] | 5.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_7804.1_16293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7804.1_16293.t1 atgctcgaattgccgcaacacaaactactggttggaattctacctgtgatatgctgtcacgatacctttttcttcagcca gctacgcaacccttatgaccaaagaaataaagaaaatgtcaaagacattgtcgtattatcaccagaagacctcaaagcta ttgaggatgtgaatgtactcgagcctctaaaaactaactacactgtttctatgatccacccattcaaggaaatgctcctt ttacaaatgaaggaggcgcagtctgactcatcacttattagagcaagtaacaagatatctacagatctacaacagagata cactgttgaagacactttacagttcctgttggagagctgtctactggacccaaggttcaaaaccttgccctacttggatg agtccagacgcaatgatgttgtctcctccttaaagatgaagtgttcattatgtgatacaaagaacgaggaaatcaacaat aatgatgaacctccttccaaaaagtgtgcactcgagaaatccttttgtgatgtgttcgtaacgaaagtggagccaccaaa gtcggcttatgagaaattctcttgtgaaatggaaagctatagatctgagaacaaaatcaatttgcaatcagatcctttga aattatggaaaggtcacaatttccaataccctatgctagcaaaaatggtgaagtactatctaggcattcctgccacttcg gtcccctccgagtga |
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Protein
| Protein ID | pfu_aug2.0_7804.1_16293.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7804.1_16293.t1 MLELPQHKLLVGILPVICCHDTFFFSQLRNPYDQRNKENVKDIVVLSPEDLKAIEDVNVLEPLKTNYTVSMIHPFKEMLL LQMKEAQSDSSLIRASNKISTDLQQRYTVEDTLQFLLESCLLDPRFKTLPYLDESRRNDVVSSLKMKCSLCDTKNEEINN NDEPPSKKCALEKSFCDVFVTKVEPPKSAYEKFSCEMESYRSENKINLQSDPLKLWKGHNFQYPMLAKMVKYYLGIPATS VPSE |
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