Gene
Gene Model ID | pfu_aug2.0_784.1_14554 |
---|---|
Locus | scaffold784.1 : 98927 ... 110275 : - |
To GenomeBrowser | scaffold784.1:98927..110275 |
Genes list of scaffold | scaffold784.1 |
Synonym | pfu_aug1.0_18429.1_32913 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_784.1_14554.t1 | 7 | 1 | Cadherin | 28 | 45 | 0.0 | 237.6 | 1.8 | 9000.0 | -3.0 |
pfu_aug2.0_784.1_14554.t1 | 7 | 2 | Cadherin | 76 | 97 | 0.0 | 237.6 | 0.0055 | 27.0 | 5.0 |
pfu_aug2.0_784.1_14554.t1 | 7 | 3 | Cadherin | 111 | 203 | 0.0 | 237.6 | 1.5e-17 | 7.5e-14 | 51.7 |
pfu_aug2.0_784.1_14554.t1 | 7 | 4 | Cadherin | 224 | 311 | 0.0 | 237.6 | 1.0e-13 | 5.2e-10 | 39.4 |
pfu_aug2.0_784.1_14554.t1 | 7 | 5 | Cadherin | 328 | 414 | 0.0 | 237.6 | 2.0e-19 | 9.7e-16 | 57.8 |
pfu_aug2.0_784.1_14554.t1 | 7 | 6 | Cadherin | 430 | 520 | 0.0 | 237.6 | 9.4e-21 | 4.7e-17 | 62.0 |
pfu_aug2.0_784.1_14554.t1 | 7 | 7 | Cadherin | 545 | 596 | 0.0 | 237.6 | 9.0e-09 | 4.4e-05 | 23.6 |
Transcript
Transcript ID | pfu_aug2.0_784.1_14554.t1 |
---|---|
Definition | - |
>pfu_aug2.0_784.1_14554.t1 atggaggctgtgtactatgtggtgctagtctgtggagttattatgacaatcggaataagtgctcaagatgattatgtacg ttttactgctgatgaagaggagcctaaagggacatatatagggaacatagcgacgaaagccaacatttccggacagaatc tatcctcggacgatgctgctactttggagtacaggctcctggttcagnctgaaagagaaaaaatggttatcgcgaaagat ggcgggaatccaccgaagtctggttccctgtctgtcacactgaacgtccttgacattaatgataatcctccagttttcga aaaaccaatttataacatcacagtaaacgaagacattggagtaaacaaaaccatcaccattctaaatgcaacggacaaag accaaggagaaaatggtagagttgtatacagaatgagcccacgacaggattccaagatattttctctgttcgcggtcaca gaatctggcgaggtcaaggtcattagttcgcttgtatcagaacctggggaactctacagaatgtatgtgattgccagtga caacgctaaacaacctctcatggctcaagccgaggttcatgtcaatgtcaaggacactcataataacagaccaagtatca aagtggatttattatcgaatacagacaaagcggaagtggtggaaaatggcgctgaaaatacagcagttgcgcatgtcact gtaacggatccggatactggactgaatggctttgtgaattgttcagttgtaagtgatgaattcaagttgcaacgatttga tgtgcacgaatacaaagtcgtcgccaaacgatcatttgacagagagatgaagcaagaatatgaagtaactgtcggttgca aagacgcaggaaccccgcctctcaatagctcattttcgttcatagtgagagttatggatgaaaacgacaacgcgccttac ttcagtaaaaattccgtacgagtcgaggtcaaggaaaacaacgacattggcgcgggactagttcgtgtctcggccaatga ttttgatgctggcaagaacgcagagattacatacgaattacagccatcggtatatgacttccggatagatcctaaatccg gaatgatcagtgcttacttccgtttggatagagaaacaacgagtatgattcagttaaaagtgttcgctgtagatggtgga acacaaccgaaaactggaacggttgatgttgtcatagaaatcaaagacattaatgataacaaaccggaattccaaaatca gagttttgagttcgccatttcagaacactctggtaaggatgccacggtaggacttctgattgccactgacaaggatttgg gtgataacaagaaaattatcttctcgttactgacacaagatgttcccggaacaccttttgacgtccttcctaatggcact atcatagcaacagatgaccttgaccgtgagacaatagacaagtatcagttcactgttgtcgcctctgactctggtgaccc cgtgcaacaatcctccgccaaggtcaccgtcactgttttggacatcaatgaccaaagtccttatttcgtgtttcctagtg acatcaatagcaccatagttatttcgtaccaaacattacctaatacggtcatagccaagcttgatacacacgacggggat gaaggactgaatgctaaagtcacttattttgctacagacaaaaagtattctgacatgtttcaaataaatagcatttcagg tcgaattgtcctcatcaaagcacttacaactgacgatattgtgattattttgaccatatgtttgataaaaagagctgata gacaaaagatgaaatacctacagtcccagcaagacgaagaaggtcgcaacggaggaaactctatcgaaaccaccaagaaa atacaaacaaagggtctgacagcaaatctaggcacagacgaacgaatccgtcaccagctcagttccctacaaatccagca agcatacgaaaaacagagatctggacaaagtccatttccctcttcctctgtaagatacgagggtgatgataacagtgaaa attcgggagaactcacgaccagcgatagtgggcgtggcggaagtgacgaagatctgcataatagtacagtcttatcctgc tcaatggattttgatggtgagattactttttcgaatagtaaatag |
Protein
Protein ID | pfu_aug2.0_784.1_14554.t1 |
---|---|
Definition | - |
>pfu_aug2.0_784.1_14554.t1 MEAVYYVVLVCGVIMTIGISAQDDYVRFTADEEEPKGTYIGNIATKANISGQNLSSDDAATLEYRLLVQXEREKMVIAKD GGNPPKSGSLSVTLNVLDINDNPPVFEKPIYNITVNEDIGVNKTITILNATDKDQGENGRVVYRMSPRQDSKIFSLFAVT ESGEVKVISSLVSEPGELYRMYVIASDNAKQPLMAQAEVHVNVKDTHNNRPSIKVDLLSNTDKAEVVENGAENTAVAHVT VTDPDTGLNGFVNCSVVSDEFKLQRFDVHEYKVVAKRSFDREMKQEYEVTVGCKDAGTPPLNSSFSFIVRVMDENDNAPY FSKNSVRVEVKENNDIGAGLVRVSANDFDAGKNAEITYELQPSVYDFRIDPKSGMISAYFRLDRETTSMIQLKVFAVDGG TQPKTGTVDVVIEIKDINDNKPEFQNQSFEFAISEHSGKDATVGLLIATDKDLGDNKKIIFSLLTQDVPGTPFDVLPNGT IIATDDLDRETIDKYQFTVVASDSGDPVQQSSAKVTVTVLDINDQSPYFVFPSDINSTIVISYQTLPNTVIAKLDTHDGD EGLNAKVTYFATDKKYSDMFQINSISGRIVLIKALTTDDIVIILTICLIKRADRQKMKYLQSQQDEEGRNGGNSIETTKK IQTKGLTANLGTDERIRHQLSSLQIQQAYEKQRSGQSPFPSSSVRYEGDDNSENSGELTTSDSGRGGSDEDLHNSTVLSC SMDFDGEITFSNSK |