Gene
| Gene Model ID | pfu_aug2.0_784.1_14555 |
|---|---|
| Locus | scaffold784.1 : 111946 ... 141375 : - |
| To GenomeBrowser | scaffold784.1:111946..141375 |
| Genes list of scaffold | scaffold784.1 |
| Synonym | pfu_aug1.0_5102.1_59700 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_784.1_14555.t1 | 2 | 1 | zf-B_box | 5 | 45 | 2.3e-11 | 43.3 | 1.1e-06 | 0.0052 | 16.6 |
| pfu_aug2.0_784.1_14555.t1 | 2 | 2 | zf-B_box | 62 | 97 | 2.3e-11 | 43.3 | 1.8e-11 | 9.0e-08 | 31.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_784.1_14555.t1 | gi|524887056|ref|XP_005100117.1| | PREDICTED: mucin-5AC-like [Aplysia californica] | 2.0e-12 |
| pfu_aug2.0_784.1_14555.t1 | gi|291228793|ref|XP_002734361.1| | PREDICTED: tripartite motif-containing protein 45-like, partial [Saccoglossus kowalevskii] | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_784.1_14555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_784.1_14555.t1 atggaatggaataaattttgtgatctatgcaaatgctcagaaatcgcaggttggaaatgtcttaactgttctgacgtcat gtgcgggacttgcgtcagaatccacagaaatggcaagatgtccaagcttcacatcatcttatccagctctcagagggcga gggaagaggtcctgctgaggaaaatcaggtgcgagcaacactctgccgaaaacaatgagatgtactgtgagcagtgcgaa aaatctatctgtaaaatctgcatcatggaggaacataagtcgcatccattgctgcatttcgaaaccaaagcggaacagga aaaagaaaggttacgtcacttcctgaaaaatgatgcgcagatcaatctcaaactgatacaggagcgcatggaccaacaag ttcagaacgaggctgaatttcgggaaaagaacgaagacatgacagagtatttggacgggcggatccgggaggtcgtgctt gctatacacaccattcaggagagaatcaaggcagagaacaccgacaaaatggtagccatgaataaaaactgtgatctact acgaaaaatgaaagtcagccatggacaagcagtcagcgatgttgaagattctttaaagcgcgacacacctcttgaattga tcacgacggcaaatgactactatgtccgactaagtccgaatattcccgaagtgatgatatgcgaggtgactgaaatgtcg gatgataaactgaataaagccatcatccaaaccgtcagaaaagaatgcaactcaaagaatgttgaagaagaatttggaca tctggttgagaaaaatgccaagcttctgaaacaaattgaacagatgaagaaagagcataaaaaagacctacaggcatacc atcaaaagttaaatgagctgtcagacagacaaacaaatatggacagagaaatgaatgctctgagatcccagaatttgaga ttacaacacgacagagaccttttgaagactgacagagactcagttctacactctgcagtgagcataaagagagagctatc acagttacattcaaaagttcaatccgaaagcctgaagattcacacaaaatctacagtacaaagatgcacgagtcgatcca gtcttgaatag |
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Protein
| Protein ID | pfu_aug2.0_784.1_14555.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_784.1_14555.t1 MEWNKFCDLCKCSEIAGWKCLNCSDVMCGTCVRIHRNGKMSKLHIILSSSQRAREEVLLRKIRCEQHSAENNEMYCEQCE KSICKICIMEEHKSHPLLHFETKAEQEKERLRHFLKNDAQINLKLIQERMDQQVQNEAEFREKNEDMTEYLDGRIREVVL AIHTIQERIKAENTDKMVAMNKNCDLLRKMKVSHGQAVSDVEDSLKRDTPLELITTANDYYVRLSPNIPEVMICEVTEMS DDKLNKAIIQTVRKECNSKNVEEEFGHLVEKNAKLLKQIEQMKKEHKKDLQAYHQKLNELSDRQTNMDREMNALRSQNLR LQHDRDLLKTDRDSVLHSAVSIKRELSQLHSKVQSESLKIHTKSTVQRCTSRSSLE |
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