Gene
| Gene Model ID | pfu_aug2.0_784.1_14556 |
|---|---|
| Locus | scaffold784.1 : 143856 ... 160620 : + |
| To GenomeBrowser | scaffold784.1:143856..160620 |
| Genes list of scaffold | scaffold784.1 |
| Synonym | pfu_aug1.0_5102.1_59699 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_784.1_14556.t1 | 7 | 1 | Cadherin_2 | 22 | 111 | 3.3e-14 | 52.2 | 3.9e-11 | 6.5e-08 | 32.0 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 1 | Cadherin | 54 | 97 | 0.0 | 330.9 | 6.7e-07 | 0.0011 | 19.1 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 2 | Cadherin | 147 | 240 | 0.0 | 330.9 | 4.0e-12 | 6.5e-09 | 35.9 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 2 | Cadherin_2 | 199 | 212 | 3.3e-14 | 52.2 | 0.1 | 170.0 | 1.8 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 3 | Cadherin | 254 | 348 | 0.0 | 330.9 | 7.7e-21 | 1.3e-17 | 63.8 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 3 | Cadherin_2 | 257 | 313 | 3.3e-14 | 52.2 | 1.6 | 2600.0 | -2.0 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 4 | Cadherin | 370 | 455 | 0.0 | 330.9 | 3.0e-13 | 5.0e-10 | 39.4 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 4 | Cadherin_2 | 400 | 426 | 3.3e-14 | 52.2 | 0.85 | 1400.0 | -1.1 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 5 | Cadherin | 471 | 558 | 0.0 | 330.9 | 1.3e-20 | 2.2e-17 | 63.0 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 5 | Cadherin_2 | 506 | 530 | 3.3e-14 | 52.2 | 0.011 | 19.0 | 4.9 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 6 | Cadherin | 573 | 665 | 0.0 | 330.9 | 6.7e-19 | 1.1e-15 | 57.6 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 6 | Cadherin_2 | 574 | 600 | 3.3e-14 | 52.2 | 0.017 | 28.0 | 4.3 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 7 | Cadherin | 692 | 762 | 0.0 | 330.9 | 4.8e-13 | 7.9e-10 | 38.8 |
| pfu_aug2.0_784.1_14556.t1 | 7 | 7 | Cadherin_2 | 722 | 749 | 3.3e-14 | 52.2 | 0.03 | 49.0 | 3.5 |
| pfu_aug2.0_784.1_14556.t1 | 8 | 8 | Cadherin | 763 | 809 | 0.0 | 330.9 | 2.2e-08 | 3.6e-05 | 23.9 |
Transcript
| Transcript ID | pfu_aug2.0_784.1_14556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_784.1_14556.t1 atgaaattaagggaaattggagaaaattctcacctggatattgtaacagtcgcatcactggaactgaattacagcctgct tgaagaaagtgaaccaaatgatcacgtgattggaaatatagcggaagactgcggactattttctttgcttcagaacgccg atgaccggaagtacatccgctttcaaattctcagcgacagtcctttttcgacattttttcgaataaaccagacttctagt gatttgtataacagtaaaagagtggatagagaatctatagataaatgcacatacgaggacacgtgtttgttacctcttgt agttgtggctcagtccgaatctagtgaattcacattctttcagcaagtatctgtggagatcatagttctggatataaacg ataaccctcctttctttcaacaaaatcaaactagtagagacatatcagagtcgtcggtcgtagattctttatttccacta gacggcgcaaccgacattgacaaaaagaacaacgtcatacagcggtacgagttacttcctcttggctcgccgttttcttt gcgatttacgaactttgtagatggaagttcttcattaagtttggttttagaccaaaaactggacagagaggaggtggata aatatgagctacgaattttagcaatagacggtggcacaccagcgctaacgggaacgctaaatctcaccgtaaacgttctt gatgaaaacgacaacaaaccagttttcgctcaaagcacctacaggataacggtaaatgaaaatgtttctgtaggctcaac tatatttaaattaaatgctaccgataaagacatcggtgataacggtaaaatttcgtatcaactaagccgatatcagccag acgaggtacggagattgtttgctattacggaggatacgggctttctcactacgtctcaatcccttatgtataccccggga acagaatacagaataattatcgaggcctccgataacgctcttcaacctctgacatcacaggtggttgtttatgtcagcgt gctcgattcgcttaacgatccaccggaagtacacgttaacttccttaccggaactggaacctctgacattttagaatcga cacgcgtcggctctgccatcgctcatgtcgccgtggatgacaaagatacaggtgaaaatggcgatgtttcgtgtcattta caaagcgatatactttacctgcaaataatgagtacaaatgaatacaaaattattttgaattcatctctggatcgagaaac tcaggatatttacaacatagttttgatttgtaaagataacggatcgccgtctcttaattctacaaaacgaattacgttga gagttaccgatgtgaacgataatgctccagagttctcgaaaattacttatttcgctgatgtgtacgaaaataataatgac gctgtcagtgttttcgaagttaaagcgatagatagagacgtcggtgacaacgccaagattcagtatactcttgtgtccgg aaacgatggattttccatagatcaagatacaggagctgtttacgtcaattttcatctcgatcgggaaacgaaaaatgttt acgatttcgttataatggcgtccgactcgggagacccacaaaagtccactctcgtcaatgcacagttaaacatactcgat cgcaatgataacaaacctgtgtttgatttttcgatatacaccttcacagtggaggaaaatagacccgtcggtctgtacgt cggtaatgtctcagccagtgacctagatatcgggctgaatgggaagattgagtatctgttgattcagaacccagacaatt atataccattcaggatactacccgatggatctatattcaccactgaagagcttgaccgtgaatcaaatcttaatgggtat aatttcaagatatatgcgagagataaaggtactaatgtgtcgctaaatacctcgtgtcatgtgacagtgttcgtatcgga tgtaaatgacaatgctccagcgtttgtatttccgaatgccgaaaattacacccttatcgtaatttatgatgtaccgaaaa acagtattgttggaaaaattgaagcactggatagggattttgacatgaatgcgaaagttacgtattcggtgatcaatgaa atcaacaatccggcaacaaaactatttagcgtagatgcagaatcgggggatatttctctcactcaggcactcacacgaga caatatccagcgttatgtgatatctgtgaatgctgaggacagaggcgtagatgcagaatcgggggatatttctctcactc aggcactcacacgagacaatatccagcgttatgtgatatctgtgaatgctgaggacagagggtacccaaaaatgtctaca aaccaaagtctcgtaattgtcgtgacttcgcatgtacttccggtgctgcagcaagatggcggcaccggtggcgattcata cttgttgatcgcggttgtgatttcgtgtgtaactgtgattgtcgctgggattattgttttgtgtattttccttatacgac gccatgataggaacaaaaacaaaactcagaatccgatctcctcgtctgctcctgttaatcttgctcagaatggacaatat gatgctgtaaagaagaatagaagggagctaactcttgtgaccaatcataaagcagacgacggaagtgaatctcggaatgg atcgccgaacacatcccaggagcagcttcttcatcagcgtcaaggatcgtacacgtcacagccaagttactgtgaggacg aagcagaaaagattctggaccggttaacccctgaaacacgagagagtttttcgtcattctgtccgtccaatggcagtgat cctaaatacagacgagggacatcactgacgtcattctcaaaacacccgatatatcattcaaataagaaaccttcgtgtaa ctttttggagggaaagaaagaagaaaagaaaggaaagaaaagcaaatgtttgtatcctgaaatttag |
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Protein
| Protein ID | pfu_aug2.0_784.1_14556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_784.1_14556.t1 MKLREIGENSHLDIVTVASLELNYSLLEESEPNDHVIGNIAEDCGLFSLLQNADDRKYIRFQILSDSPFSTFFRINQTSS DLYNSKRVDRESIDKCTYEDTCLLPLVVVAQSESSEFTFFQQVSVEIIVLDINDNPPFFQQNQTSRDISESSVVDSLFPL DGATDIDKKNNVIQRYELLPLGSPFSLRFTNFVDGSSSLSLVLDQKLDREEVDKYELRILAIDGGTPALTGTLNLTVNVL DENDNKPVFAQSTYRITVNENVSVGSTIFKLNATDKDIGDNGKISYQLSRYQPDEVRRLFAITEDTGFLTTSQSLMYTPG TEYRIIIEASDNALQPLTSQVVVYVSVLDSLNDPPEVHVNFLTGTGTSDILESTRVGSAIAHVAVDDKDTGENGDVSCHL QSDILYLQIMSTNEYKIILNSSLDRETQDIYNIVLICKDNGSPSLNSTKRITLRVTDVNDNAPEFSKITYFADVYENNND AVSVFEVKAIDRDVGDNAKIQYTLVSGNDGFSIDQDTGAVYVNFHLDRETKNVYDFVIMASDSGDPQKSTLVNAQLNILD RNDNKPVFDFSIYTFTVEENRPVGLYVGNVSASDLDIGLNGKIEYLLIQNPDNYIPFRILPDGSIFTTEELDRESNLNGY NFKIYARDKGTNVSLNTSCHVTVFVSDVNDNAPAFVFPNAENYTLIVIYDVPKNSIVGKIEALDRDFDMNAKVTYSVINE INNPATKLFSVDAESGDISLTQALTRDNIQRYVISVNAEDRGVDAESGDISLTQALTRDNIQRYVISVNAEDRGYPKMST NQSLVIVVTSHVLPVLQQDGGTGGDSYLLIAVVISCVTVIVAGIIVLCIFLIRRHDRNKNKTQNPISSSAPVNLAQNGQY DAVKKNRRELTLVTNHKADDGSESRNGSPNTSQEQLLHQRQGSYTSQPSYCEDEAEKILDRLTPETRESFSSFCPSNGSD PKYRRGTSLTSFSKHPIYHSNKKPSCNFLEGKKEEKKGKKSKCLYPEI |
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