Gene
Gene Model ID | pfu_aug2.0_784.1_14557 |
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Locus | scaffold784.1 : 178874 ... 191421 : - |
To GenomeBrowser | scaffold784.1:178874..191421 |
Genes list of scaffold | scaffold784.1 |
Synonym | pfu_aug1.0_10271.1_68167 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_784.1_14557.t1 | 5 | 1 | Cadherin_2 | 24 | 109 | 1.9e-17 | 62.5 | 9.0e-17 | 3.3e-13 | 48.9 |
pfu_aug2.0_784.1_14557.t1 | 7 | 1 | Cadherin | 27 | 96 | 0.0 | 298.5 | 4.1e-09 | 1.5e-05 | 25.1 |
pfu_aug2.0_784.1_14557.t1 | 7 | 2 | Cadherin | 141 | 232 | 0.0 | 298.5 | 3.8e-14 | 1.4e-10 | 41.2 |
pfu_aug2.0_784.1_14557.t1 | 5 | 2 | Cadherin_2 | 172 | 204 | 1.9e-17 | 62.5 | 0.17 | 640.0 | 0.0 |
pfu_aug2.0_784.1_14557.t1 | 7 | 3 | Cadherin | 247 | 341 | 0.0 | 298.5 | 6.2e-19 | 2.3e-15 | 56.5 |
pfu_aug2.0_784.1_14557.t1 | 7 | 4 | Cadherin | 361 | 450 | 0.0 | 298.5 | 1.5e-12 | 5.5e-09 | 36.1 |
pfu_aug2.0_784.1_14557.t1 | 5 | 3 | Cadherin_2 | 405 | 423 | 1.9e-17 | 62.5 | 0.083 | 310.0 | 1.0 |
pfu_aug2.0_784.1_14557.t1 | 7 | 5 | Cadherin | 466 | 554 | 0.0 | 298.5 | 4.3e-22 | 1.6e-18 | 66.7 |
pfu_aug2.0_784.1_14557.t1 | 5 | 4 | Cadherin_2 | 501 | 527 | 1.9e-17 | 62.5 | 0.06 | 220.0 | 1.4 |
pfu_aug2.0_784.1_14557.t1 | 5 | 5 | Cadherin_2 | 569 | 627 | 1.9e-17 | 62.5 | 0.035 | 130.0 | 2.2 |
pfu_aug2.0_784.1_14557.t1 | 7 | 6 | Cadherin | 571 | 658 | 0.0 | 298.5 | 5.2e-13 | 1.9e-09 | 37.6 |
pfu_aug2.0_784.1_14557.t1 | 7 | 7 | Cadherin | 685 | 765 | 0.0 | 298.5 | 1.4e-14 | 5.0e-11 | 42.6 |
Transcript
Transcript ID | pfu_aug2.0_784.1_14557.t1 |
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Definition | - |
>pfu_aug2.0_784.1_14557.t1 atgtctagtcaaacagcggtgctagtgttgtccagtttgttactgctggtcactaggtcacattctcaggatctccaata cacaatcaaggaagaaagatcgtccggtagtaaaataggaaacatcgtcaacgattcaacggtgctagatagaacaatct cgggagtggaatacagaattctgactcaggggaatgaattcgcaaaatattttcgaatcgacaacagaactggagattta tttacatcagaagttctagacagagagagtttaacagattgtgaattttcagatgtttgtacgattccgctcgaaattat agcacaagcaccgggtggacgttactttaagaaggtgggaatccagtttataatagaggatatcaatgataatgcaccta aattcacttccaatcagacaactgtagaaatatcagagtcgtctgctactggggaatccttatcactagagggcgctgta gacttagatatcggtatcaattctgtgctgacttatagaatcgttccttccgaaaatgttccttttgtagtcgtggatga taaaagtccaattattaaacttcagctggtccaaaaaatcgacagagaaacaacagacaagtatcagtttcaaattctag ctatagacggcggaagtgtgccattaactggagctctggaagtcactgttctaataacagataataatgacaacaaacca aagtttttacagcctgtgttcaatatatcaatagacgaggatttggcggtaaattctgtcattctgaatatcagtgcaac tgacccggacgaaggcgtgaatggtgaagtttcgtatcgtctcagttcacaccaatcagaggaaattcgaaacatgtttg ccatcgactctgcacttggaaacttgacaataatcaaacctcttacatatcaaccaggagaaacattaaaaatcatcatc gaagcgtcggataacgctattcaaccactgatatctcaagccatcgtgtacgtcaaagttctcgattccacgaatgacgt accggaaatacacgtaaacttgctatcgagttcaagccgcgcaagcatagctgaaaacgcaacaatcggcgcagctgtcg ctcacgtaaaagtaacggatgacgatttgggaacaaacggttatgttaattgttctgtgacacggggacacgagttcttt ggtcttgaaaaactggatgtgaacgaatacaaagttgtggtatctgcaaaacttgatcgcgagaagaaagcatttcatga cgtcactgtcacgtgtcaggactttggagtcccttcattgaacgcgtcagaaaattttgaagtcgaaattttggatataa atgaagaaccgccaaaattcgtgaaaagcatatttgaagttagtataacagaaaacaacaatatcggagcgttacttaca actgtgtctgctatagacacggatagtggaatgaatgccagaatacgatattcattactgcagacgggaaaatataattt tgtcattgattccgttacaggggaaattcgagtaaattttgtactagacagggagacggtacccgaaataacgtttaaag ttgcggcatctgacagtggtgtacaacctaagacaggtctggccactgtcatagttattatactggacgataacgataac gatccaagttttgaaaatcagccaattacactctccgtcctggaaaaccaaccaatcgacacatttgttggaaaagttaa ggcaaccgacattgatgctagagaaaatggcactgttaaatacaaaatgaaggaccagttgtctacattttggatttcgg acaatgggtcgatatttacgaaagacattatagatcgtgagttatatccacatggaatcacattgagtgtaatagcatac gatcaaggtcaaatcattagtagaaatgcgtctgcacttgtaactgtacttgtaacggacatcaacgacaacgctccgat tcttgtgtttccaaacgaagttaaccgaacaatcacgatgatttacgatcttccagaagggaccatcatagggcgtgtgg aggctgaggataaagactatagtatcaacgctaaactcacatactcatttagtgaaaaaagcgcgcacttgctctttcgt atagatggcgacaccggtgaaataaaaaccgccagatcttttactacccaagacatcaatcgatatgtatttaccattac agtggaagatcaaggtgttccgaaatattctgtcaaccatacattgatcgtagcaattatttcaaacatctatgaaccta taccgagatttaaggaggaaggaggggacagttatcttctcattgctgtcgtcatatcctgtgttaccgttgttttggcg ggagttatcattttggttatattcttactcagaagaattgatcagaagaaacgcgagcacgaaaatgccacccaccaaga acaacttgcaaatagtcagaaatctggactgtacgacgcattggatgtaagccgagacctaccgaagaccaaaagtgaaa aacgagtcagtttctcggattccctggaaagtacggacactcctatagaaaggccatccttcaagatgactcctagtaaa gaaaaaatagaacagttactggatcagatatcgacccctcccacagcccgggagtctcaggttcgctcccttggattacg gtcccccggtcgccagaaccccaggtcacaattggagaaaatgaaattacagaaggagcttctccagttacataactcaa ggatggcatcgatggtgagaatgcaggatgataacgaaagtgaaacctccatagaatccaacacatcagacagtgggcgt ggcggaagtgaaagtgacatccacagcactctgggtcagatccacgtaccggaaatagtgactatgggtgcaaatttaag accttatcattactttaattttaaaaatagtctggacaatttccagagacattctatttctgatgtcgttagtgaaagtg tcgccacttatgacgaatacgacaacgcatcgacgacaacttccggtagctatacagtggacgatcttgatgctgacttc cggtctgacgtcatagtgtag |
Protein
Protein ID | pfu_aug2.0_784.1_14557.t1 |
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Definition | - |
>pfu_aug2.0_784.1_14557.t1 MSSQTAVLVLSSLLLLVTRSHSQDLQYTIKEERSSGSKIGNIVNDSTVLDRTISGVEYRILTQGNEFAKYFRIDNRTGDL FTSEVLDRESLTDCEFSDVCTIPLEIIAQAPGGRYFKKVGIQFIIEDINDNAPKFTSNQTTVEISESSATGESLSLEGAV DLDIGINSVLTYRIVPSENVPFVVVDDKSPIIKLQLVQKIDRETTDKYQFQILAIDGGSVPLTGALEVTVLITDNNDNKP KFLQPVFNISIDEDLAVNSVILNISATDPDEGVNGEVSYRLSSHQSEEIRNMFAIDSALGNLTIIKPLTYQPGETLKIII EASDNAIQPLISQAIVYVKVLDSTNDVPEIHVNLLSSSSRASIAENATIGAAVAHVKVTDDDLGTNGYVNCSVTRGHEFF GLEKLDVNEYKVVVSAKLDREKKAFHDVTVTCQDFGVPSLNASENFEVEILDINEEPPKFVKSIFEVSITENNNIGALLT TVSAIDTDSGMNARIRYSLLQTGKYNFVIDSVTGEIRVNFVLDRETVPEITFKVAASDSGVQPKTGLATVIVIILDDNDN DPSFENQPITLSVLENQPIDTFVGKVKATDIDARENGTVKYKMKDQLSTFWISDNGSIFTKDIIDRELYPHGITLSVIAY DQGQIISRNASALVTVLVTDINDNAPILVFPNEVNRTITMIYDLPEGTIIGRVEAEDKDYSINAKLTYSFSEKSAHLLFR IDGDTGEIKTARSFTTQDINRYVFTITVEDQGVPKYSVNHTLIVAIISNIYEPIPRFKEEGGDSYLLIAVVISCVTVVLA GVIILVIFLLRRIDQKKREHENATHQEQLANSQKSGLYDALDVSRDLPKTKSEKRVSFSDSLESTDTPIERPSFKMTPSK EKIEQLLDQISTPPTARESQVRSLGLRSPGRQNPRSQLEKMKLQKELLQLHNSRMASMVRMQDDNESETSIESNTSDSGR GGSESDIHSTLGQIHVPEIVTMGANLRPYHYFNFKNSLDNFQRHSISDVVSESVATYDEYDNASTTTSGSYTVDDLDADF RSDVIV |