Gene
Gene Model ID | pfu_aug2.0_784.1_14558 |
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Locus | scaffold784.1 : 203952 ... 211562 : + |
To GenomeBrowser | scaffold784.1:203952..211562 |
Genes list of scaffold | scaffold784.1 |
Synonym | pfu_aug1.0_6225.1_67396 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_784.1_14558.t1 | 5 | 1 | Cadherin_2 | 12 | 99 | 1.7e-12 | 46.7 | 5.8e-13 | 2.9e-09 | 36.3 |
pfu_aug2.0_784.1_14558.t1 | 7 | 1 | Cadherin | 46 | 86 | 0.0 | 308.7 | 7.4e-06 | 0.037 | 14.2 |
pfu_aug2.0_784.1_14558.t1 | 7 | 2 | Cadherin | 133 | 226 | 0.0 | 308.7 | 2.9e-13 | 1.4e-09 | 38.0 |
pfu_aug2.0_784.1_14558.t1 | 5 | 2 | Cadherin_2 | 184 | 197 | 1.7e-12 | 46.7 | 0.11 | 530.0 | 0.2 |
pfu_aug2.0_784.1_14558.t1 | 7 | 3 | Cadherin | 240 | 334 | 0.0 | 308.7 | 2.6e-20 | 1.3e-16 | 60.6 |
pfu_aug2.0_784.1_14558.t1 | 7 | 4 | Cadherin | 357 | 442 | 0.0 | 308.7 | 1.1e-13 | 5.6e-10 | 39.3 |
pfu_aug2.0_784.1_14558.t1 | 5 | 3 | Cadherin_2 | 359 | 373 | 1.7e-12 | 46.7 | 0.23 | 1100.0 | -0.8 |
pfu_aug2.0_784.1_14558.t1 | 7 | 5 | Cadherin | 459 | 548 | 0.0 | 308.7 | 2.0e-15 | 1.0e-11 | 44.9 |
pfu_aug2.0_784.1_14558.t1 | 5 | 4 | Cadherin_2 | 496 | 520 | 1.7e-12 | 46.7 | 0.13 | 630.0 | 0.0 |
pfu_aug2.0_784.1_14558.t1 | 7 | 6 | Cadherin | 563 | 652 | 0.0 | 308.7 | 5.9e-25 | 2.9e-21 | 75.5 |
pfu_aug2.0_784.1_14558.t1 | 5 | 5 | Cadherin_2 | 564 | 582 | 1.7e-12 | 46.7 | 0.066 | 330.0 | 0.9 |
pfu_aug2.0_784.1_14558.t1 | 7 | 7 | Cadherin | 672 | 757 | 0.0 | 308.7 | 1.6e-13 | 7.9e-10 | 38.8 |
Transcript
Transcript ID | pfu_aug2.0_784.1_14558.t1 |
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Definition | - |
>pfu_aug2.0_784.1_14558.t1 atgagaacttatattggtgccatagccaggacggtgctgtattcgatggatgaagaaaatgaccaagaccatattctggg gaacgtatcgcaggatgcaaatttaagggaccttcttggacccgcggacaatcttaccgacttaaggtacaccatcctta ctacggggaatcaagtggcgtctttgttcactattgacggtaagacgagtactttgtcaacaaatcaggttcttgaccgg gatacattgtgtcagtatgatcctgtttgcattttgaaatttgatgttgttgcaaagtcagaagttacggacttctttca taaaataacagtttctgtgacgctaaaagacataaatgataatactccagagtttccagatcccgtcgtcgaggttcctc tggcggaaaattctgtcatcggcacagaaacgccgctggcaggtgcgatagacctggactctgggaacaattctgtccaa gcctacaggatatttccggaaagtgtgcctttcatcatcaatgaagaattctatcccgatggaagatcgacactgcgcct cgttgtttcaagaaaattggacagggaaactgaagataggtatagatttaagattttggcattggacagaggaaatcctg tcaaaacgggttctgtaataattgatgtaaatgttttggatatcaacgacaacccgcctaattttgaaaaagatatttat aacatctctattgctgaggatttccctctgaacaccatgattcttagagtaaaagctctagatagcgatatcggcgagaa cggagaagtcttctatcgacttagtcaacgacaaaacgacgaaatacgtcgcattttctatattcatccgacatccgggg aactgagtctcatgacgtcattgataacggagagtcgtcctacgtacacggtgatcgtagaggcatctgataacgcttca gcaccgctcatatcgcaggctcaaattctcgtaaccgtgttggacacgcataacgcgcaacccgctattaaaactacact cttctttacacaaaacaactcaaatttcatacatattgtcgaaaatgtgaaaaatggtacagttatagcatcgatatctg ccgtggaccctgacaaaggtttaaacggccaggtggattgtgtctccaatgactcagactttcgtttatggaaagttgag acaaacgggtataccttggctgtatttgggaaattaaaccgtgaattgtcagagaaacataatatcaagatccagtgtac agataaaggagctcccccgaaaagtgcgtttgaaattatcacggttatacttactgatgtcaatgataacgcaccaaaat tcacgcaagatgtctaccgcgttgaaaagccggaaaatgagcccaacagcagtatattccaggttatagcaaacgattcc gacattacaccgacgtctataacttattttataagtaataccagcgatgcggttgaaaatttctatgtagatagttcctc cgggattgtctataataaaagacctcttgaccgggagctatcatcattcatcagcattcctgtagttgctagggacaaca agcctccttttcataccggaagtgccattctggaagtaatcgttctagatgtcaatgacaatgcaccatattttctccat gataaatataattttagtctgttagaaaaccaacccacaaatactttcgtaggaaaagtctttgctgaagacaaagacga aggcaagaatgccgaggttaccttttctgctcaaaatattaatgatttaccatttagaatattctcaaacggctctattt ttacaacaaggccgttggacagagaagcatctgcccagtatacgataagtgtagtggccagagatcgtggtagtccggcc ttgtccaatgttactaatgtgacagtgtcagtcctggacgtcaatgataatagtcccaaaatccatgttcaagaggtact ccgtatatctcagtttacgccagcaaatactcagttctttgtcatcaatgcaacagacgatgattttgaaacgaattctc agttaatttatgacattgaggaccagagtaacgtctcaaaaattatatcaatcaacaaactacaagggcagctaagactt gtgagaagtctgacgtctgacgacgtcggacaatacaaatgtgttgtcatagtgacagatatgggtaattcaccccgaac ttcctctgcttcttttaccattttcgtcacacgtgacgacatctctacgcaaaaatatacctcagaggccgccattaagt attacgccattgctgtggcgatctgttgtgttactatagtgctttcgtctgtgataattctagtcatttgtctcattcgc cgaaaagatcgtctggagggagataaaacgaacagcagtattacgtcacaagtgacgcaagactctgatctaagtcaaat ggacatgcgtattaacgacacttatagtacagactatgtgccaggaacgttgatgaagagtttcagtggcgccctacatg gtttaccattatgtagcattaaaacatctcgagtagaagctataaagattgagataatgtcaatccttaaacctagattt gaagaggaggattccgatgagactccaccggaagtaatttcagaagacgtcacaatttgggactggaaccaaccttatac gcatgcgtacagatcgcttgatcaatactccccggatgaacccccaaatatttacggcatggatcagaagaactatatgg gcccaaatgtggtaagactttgtacttttacaacttgtgcatgtttgatcattttgctcgccaagattccggatattttc aagtaa |
Protein
Protein ID | pfu_aug2.0_784.1_14558.t1 |
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Definition | - |
>pfu_aug2.0_784.1_14558.t1 MRTYIGAIARTVLYSMDEENDQDHILGNVSQDANLRDLLGPADNLTDLRYTILTTGNQVASLFTIDGKTSTLSTNQVLDR DTLCQYDPVCILKFDVVAKSEVTDFFHKITVSVTLKDINDNTPEFPDPVVEVPLAENSVIGTETPLAGAIDLDSGNNSVQ AYRIFPESVPFIINEEFYPDGRSTLRLVVSRKLDRETEDRYRFKILALDRGNPVKTGSVIIDVNVLDINDNPPNFEKDIY NISIAEDFPLNTMILRVKALDSDIGENGEVFYRLSQRQNDEIRRIFYIHPTSGELSLMTSLITESRPTYTVIVEASDNAS APLISQAQILVTVLDTHNAQPAIKTTLFFTQNNSNFIHIVENVKNGTVIASISAVDPDKGLNGQVDCVSNDSDFRLWKVE TNGYTLAVFGKLNRELSEKHNIKIQCTDKGAPPKSAFEIITVILTDVNDNAPKFTQDVYRVEKPENEPNSSIFQVIANDS DITPTSITYFISNTSDAVENFYVDSSSGIVYNKRPLDRELSSFISIPVVARDNKPPFHTGSAILEVIVLDVNDNAPYFLH DKYNFSLLENQPTNTFVGKVFAEDKDEGKNAEVTFSAQNINDLPFRIFSNGSIFTTRPLDREASAQYTISVVARDRGSPA LSNVTNVTVSVLDVNDNSPKIHVQEVLRISQFTPANTQFFVINATDDDFETNSQLIYDIEDQSNVSKIISINKLQGQLRL VRSLTSDDVGQYKCVVIVTDMGNSPRTSSASFTIFVTRDDISTQKYTSEAAIKYYAIAVAICCVTIVLSSVIILVICLIR RKDRLEGDKTNSSITSQVTQDSDLSQMDMRINDTYSTDYVPGTLMKSFSGALHGLPLCSIKTSRVEAIKIEIMSILKPRF EEEDSDETPPEVISEDVTIWDWNQPYTHAYRSLDQYSPDEPPNIYGMDQKNYMGPNVVRLCTFTTCACLIILLAKIPDIF K |