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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_7845.1_19606
Locus scaffold7845.1 : 1 ... 12431 : +
To GenomeBrowser scaffold7845.1:1..12431
Genes list of scaffold scaffold7845.1
Synonym pfu_aug1.0_10347.1_39035

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_7845.1_19606.t1 gi|260815755|ref|XP_002602638.1| hypothetical protein BRAFLDRAFT_81918 [Branchiostoma floridae] 7.0e-16
pfu_aug2.0_7845.1_19606.t1 gi|296201034|ref|XP_002747862.1| PREDICTED: scavenger receptor class F member 1 [Callithrix jacchus] 1.0e-14
pfu_aug2.0_7845.1_19606.t1 gi|676462773|ref|XP_009056378.1| hypothetical protein LOTGIDRAFT_175634 [Lottia gigantea] 2.0e-14

Transcript
Transcript IDpfu_aug2.0_7845.1_19606.t1
Definition-
>pfu_aug2.0_7845.1_19606.t1
ttgaattggccagtggtaaactagcagagtcgaatggagccagcccttcgcattggtctgcatcagatgctgtggatggc
gacactaatacaaatataaaatgtggttcatgtctacaaacagaacaagaatcgccagcttatctaaaggtggatcttgg
tgatcagtatacaatcaacagggttgtaatatattttgcaacatcaaagccttcttcgtgccaagacaactcaatagaca
acggatggagggaaaaatttcaaaaacgtaatatgaggagcaccgttcgagtgaacaatacaaacactatctggggaaca
atttgccacagagatcgaactggtgacttcagagactttgatcttttccaaaacgtatcttgtaagagtacctgcagata
cgtcagtattgtgcagtattatgtcagccaggagtcacacataacaaagccaattttagcagtgtgcgagttcaaagttt
acggttgcagaataaacttctatggacctaattgtagcagcaaatgccctgaacagtgcaaagctgaaaaatgcgaccct
gactttggatgttcggaatgttttggaaggggaattaatgccgactgttccgaatgtcaagatggtacatatggttacaa
ttgtaatgaaacttgcggagcttgtttgaacggagatgtttgtgataaaaagaatggaagctgtcctcagaaatgtgact
taggattcagaggaatagattgtaaaacagagtgtgatgaaggattttatggacataattgcaatgagacttgcggcaac
tgtttactcaacgggacatgtgatagtaaaagcgggcattgttctacgtgccaagagggatatatgtatccgctgtgtaa
agaac

Protein
Protein IDpfu_aug2.0_7845.1_19606.t1
Definition-
>pfu_aug2.0_7845.1_19606.t1
ELASGKLAESNGASPSHWSASDAVDGDTNTNIKCGSCLQTEQESPAYLKVDLGDQYTINRVVIYFATSKPSSCQDNSIDN
GWREKFQKRNMRSTVRVNNTNTIWGTICHRDRTGDFRDFDLFQNVSCKSTCRYVSIVQYYVSQESHITKPILAVCEFKVY
GCRINFYGPNCSSKCPEQCKAEKCDPDFGCSECFGRGINADCSECQDGTYGYNCNETCGACLNGDVCDKKNGSCPQKCDL
GFRGIDCKTECDEGFYGHNCNETCGNCLLNGTCDSKSGHCSTCQEGYMYPLCKE

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