Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_787.1_24403
Locus scaffold787.1 : 70576 ... 74510 : +
To GenomeBrowser scaffold787.1:70576..74510
Genes list of scaffold scaffold787.1
Synonym pfu_aug1.0_907.1_58304

Manual annotation
Annotation by Blast2GO
Annotation GO
pannexin 2 GO:0006810 GO:0016020 GO:0030054

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_787.1_24403.t1 1 1 Innexin 38 401 0.0 384.9 0.0 0.0 384.7

Transcript
Transcript IDpfu_aug2.0_787.1_24403.t1
Definition-
>pfu_aug2.0_787.1_24403.t1
atgctaattgcttatgacaagaggaaggatcctattgattttcaaggtcataggattacacaattgcttggaggctacgc
caactggggcaagatctctggtaactatgacgatgactggatagatagtatgaaccatatatggacggttctgttactag
caatatttgccgttgccataacgtctggccagtttatgggtaatcccattgagtgttggatgccggcaaattttcccgca
acgcacgtagcttacgcaaagtcgttatgctgggtgtccaacacttattacattccgttagaggatactattccaactga
tataaaaactagacaagaagccgagatcacctattaccagtgggttccggtcatattactttttcaagcatttttgttca
aatttccgaatctagtctggaaaatgtgcaatggatattctggtctcaacatggataagatatgtaggatggcggactct
accatgcttaactctccggaggatcgcactaaagaaattacaaatctggctcgctacctgaacaagtggcttataacgca
aaggaactatcattataatgccttgataagagtacgcaaaagagtatcgaacatcttctgtttctgcattgggaaaaaag
acgggaaatttctgacgggattttatctcttcataaaactgctctatgtgctgaatattgttgggcagtttttccttctg
aatgcttttatggccaatgattaccacatctttggtcttgaacttattcggtacctaataggtcagggcgattggatgcc
aatgccaaaatttccgcgcgtcactttgtgcgatttcgaaattcgtcagctatccaatctccagaagtggacagtgcaat
gcgtcctaccggtcaacatgttcaacgaaaaaatcttcatttttctatggttctggttcttcttactcgccattttagca
tttttcaacctgtttttgtggttctactatattctcttcactacgaacaaaaccaaatatgttcgcaagtatctacgcat
aaaccgggagcttaacactgcctttgacaagaagctttcacaaaagtttgcggaagaatatttacgtgatgacgggatat
ttgttctacgcattatagccaagaattcctctgatatggtggtgaccgatctagtctatgcactgtggaaagtattcaag
gagacacattgtgcaaagaaacgggagaatgctggaatggaagatatagaaagagaaaaactcaacggaagtacgcattt
ttacccaaatggttgtgcgtaa

Protein
Protein IDpfu_aug2.0_787.1_24403.t1
Definition-
>pfu_aug2.0_787.1_24403.t1
MLIAYDKRKDPIDFQGHRITQLLGGYANWGKISGNYDDDWIDSMNHIWTVLLLAIFAVAITSGQFMGNPIECWMPANFPA
THVAYAKSLCWVSNTYYIPLEDTIPTDIKTRQEAEITYYQWVPVILLFQAFLFKFPNLVWKMCNGYSGLNMDKICRMADS
TMLNSPEDRTKEITNLARYLNKWLITQRNYHYNALIRVRKRVSNIFCFCIGKKDGKFLTGFYLFIKLLYVLNIVGQFFLL
NAFMANDYHIFGLELIRYLIGQGDWMPMPKFPRVTLCDFEIRQLSNLQKWTVQCVLPVNMFNEKIFIFLWFWFFLLAILA
FFNLFLWFYYILFTTNKTKYVRKYLRINRELNTAFDKKLSQKFAEEYLRDDGIFVLRIIAKNSSDMVVTDLVYALWKVFK
ETHCAKKRENAGMEDIEREKLNGSTHFYPNGCA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495