Gene
| Gene Model ID | pfu_aug2.0_787.1_24407 |
|---|---|
| Locus | scaffold787.1 : 133177 ... 143035 : - |
| To GenomeBrowser | scaffold787.1:133177..143035 |
| Genes list of scaffold | scaffold787.1 |
| Synonym | pfu_aug1.0_5051.1_09035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_787.1_24407.t1 | 1 | 1 | Cyclin | 83 | 165 | 2.8e-06 | 27.7 | 1.2e-09 | 6.0e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_787.1_24407.t1 | gi|585680152|ref|XP_002737287.2| | PREDICTED: protein CNPPD1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_787.1_24407.t1 | gi|597743369|ref|XP_007233763.1| | PREDICTED: protein CNPPD1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_787.1_24407.t1 | gi|675603414|ref|XP_008933419.1| | PREDICTED: protein CNPPD1, partial [Merops nubicus] | 0.0 |
| pfu_aug2.0_787.1_24407.t1 | gi|632985205|ref|XP_007909549.1| | PREDICTED: protein CNPPD1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_787.1_24407.t1 | gi|695163247|ref|XP_009509952.1| | PREDICTED: protein CNPPD1, partial [Phalacrocorax carbo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_787.1_24407.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_787.1_24407.t1 atggcatctttccaagttcccttttccagggggaactttggacctccaagattagaatcagaggatcatgaggagttggc agaaaggctgcggaagacactgtactatggacaacatcctaaatcagaccgtccgtccctgcccttgacagaggcagcaa ttgagttttttcaggaagctgctccaaggaaactaggtcgcattgacccagattttgctgcagcaactgtcagacaagca tgtgtttccccaagttccgtaatgatgggaatgatgtacaccaaacgtctacgacacagaaatcccgagtatttacaaca gattacttcctccgacctcttcctcatatcaatgatgatggcgtctaagtacctgtatgatgaagggacggatgacgaaa tctttaacgatgaatgggcggcatcagctgacatggaaacggaggaaattaaccaaatggagcggaacttcctctctgcg attgattggaatttgttcatccacaggagagagttcgagaatgtattacatgatattgagaaacgcatttatgttttaca ggtcttcctagtaactagtcttgcctacattgccggtatcctgacaatggtcggctcaacattactagtgactggtgctg ccactgcattatctcccttgatgttgactgcaagctcagttgttcaaccttcaccagaagtcccaaaagctgtgcttcca ggtcaaattctccaagacagcctgagctcgaaaaggtcatggtccgttagtgctgttatctcacagcttttgacccttgt ctccattccctccttgtttaccgtatcaaggagtcctggtcgaccaaagatagacgaggcgagacgtcaaaatcgctcgt gcagcccaaatgaacgagataccaatttagaatgtatagcatatgaccacaatcaagctacaaccaaatctgaacaacta caacctcactgtcagttaatgggtaatgcccagacctctgaatctattgccactgtgaatgaatctcccacttctgacac caatttgaaacaacattctggtttaagtcttgcctatactgtgttattgacaattcaggacatgctagctcactatgcta aaaggtttgatgaaggaaaggagagtgagagtgggaccaataggcattcggaaagagtgtgtgcggagggaccatgctta caatcctcgaatcgttactgctggaacgttacaatgggtattagaaagggaacacttaatcaatgtagagaatgtgccaa aactgccactaacggaaatcagaactgtcaaacaaataagggtacggaacaaatcaaatctggacatgaaaggttgtgcg gaaacatcccaactttcaacataggtgctggaaaatgtggagatagatcttcgtgctgtggaggtcgtgaaaaagggggt caaggtcaatttggtcgggaatcttcaaggccagtcctgtatgatgagaatccatcagtcagttgctgctgtcaggaacc gctgttggccaccgtggacagagggggaggctttctggacgtgtcgctgggctttcatactcagcatagtgtatttgtga cgtactga |
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Protein
| Protein ID | pfu_aug2.0_787.1_24407.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_787.1_24407.t1 MASFQVPFSRGNFGPPRLESEDHEELAERLRKTLYYGQHPKSDRPSLPLTEAAIEFFQEAAPRKLGRIDPDFAAATVRQA CVSPSSVMMGMMYTKRLRHRNPEYLQQITSSDLFLISMMMASKYLYDEGTDDEIFNDEWAASADMETEEINQMERNFLSA IDWNLFIHRREFENVLHDIEKRIYVLQVFLVTSLAYIAGILTMVGSTLLVTGAATALSPLMLTASSVVQPSPEVPKAVLP GQILQDSLSSKRSWSVSAVISQLLTLVSIPSLFTVSRSPGRPKIDEARRQNRSCSPNERDTNLECIAYDHNQATTKSEQL QPHCQLMGNAQTSESIATVNESPTSDTNLKQHSGLSLAYTVLLTIQDMLAHYAKRFDEGKESESGTNRHSERVCAEGPCL QSSNRYCWNVTMGIRKGTLNQCRECAKTATNGNQNCQTNKGTEQIKSGHERLCGNIPTFNIGAGKCGDRSSCCGGREKGG QGQFGRESSRPVLYDENPSVSCCCQEPLLATVDRGGGFLDVSLGFHTQHSVFVTY |
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