Gene
| Gene Model ID | pfu_aug2.0_787.1_24410 |
|---|---|
| Locus | scaffold787.1 : 194999 ... 237689 : - |
| To GenomeBrowser | scaffold787.1:194999..237689 |
| Genes list of scaffold | scaffold787.1 |
| Synonym | pfu_aug1.0_5286.1_16623 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein 8 homolog isoform x1 | GO:0006810 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_787.1_24410.t1 | 4 | 1 | Vps8 | 352 | 535 | 0.0 | 210.9 | 0.0 | 0.0 | 203.0 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 1 | Clathrin | 401 | 457 | 1.3e-13 | 50.7 | 0.00069 | 1.5 | 8.4 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 2 | Clathrin | 615 | 695 | 1.3e-13 | 50.7 | 2.6e-05 | 0.055 | 13.0 |
| pfu_aug2.0_787.1_24410.t1 | 4 | 2 | Vps8 | 668 | 694 | 0.0 | 210.9 | 1.4 | 3000.0 | -2.8 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 3 | Clathrin | 735 | 846 | 1.3e-13 | 50.7 | 2.3e-10 | 4.9e-07 | 29.4 |
| pfu_aug2.0_787.1_24410.t1 | 4 | 3 | Vps8 | 757 | 859 | 0.0 | 210.9 | 9.3e-05 | 0.2 | 10.9 |
| pfu_aug2.0_787.1_24410.t1 | 4 | 4 | Vps8 | 918 | 960 | 0.0 | 210.9 | 2.1 | 4500.0 | -3.4 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 1 | TSP_1 | 1699 | 1749 | 1.1e-26 | 92.6 | 3.2e-07 | 0.00067 | 19.7 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 1 | Ldl_recept_a | 1744 | 1751 | 5.2e-06 | 26.2 | 2.8 | 5800.0 | -2.8 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 2 | TSP_1 | 1759 | 1808 | 1.1e-26 | 92.6 | 3.7e-14 | 7.8e-11 | 41.9 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 3 | TSP_1 | 1816 | 1865 | 1.1e-26 | 92.6 | 2.4e-14 | 5.1e-11 | 42.5 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 2 | Ldl_recept_a | 1866 | 1901 | 5.2e-06 | 26.2 | 1.3e-06 | 0.0027 | 17.5 |
| pfu_aug2.0_787.1_24410.t1 | 3 | 3 | Ldl_recept_a | 1933 | 1966 | 5.2e-06 | 26.2 | 4.4e-06 | 0.0092 | 15.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_787.1_24410.t1 | gi|676460857|ref|XP_009055758.1| | hypothetical protein LOTGIDRAFT_215952 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_787.1_24410.t1 | gi|585677935|ref|XP_006819234.1| | PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_787.1_24410.t1 | gi|390340001|ref|XP_798078.2| | 0.0 | |
| pfu_aug2.0_787.1_24410.t1 | gi|556987737|ref|XP_005999154.1| | PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_787.1_24410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_787.1_24410.t1 ttcacagacagtcctgttctggcagtatgcagtgatagtggcggttctgtgtttgaactggagttcaatcgtggagaagt ttgtgcgatagaaccactacacatgaattatactatcaaggaccaccccatgcaggatgttatgcttgttgctatggcaa ctctttctaaagggagtggaaacactttaccattattagcctggcagtttgtcatcatacaagtgtcggagaaagacaga gttattgaccctgtacttgcatttgccagagaatccaccatctttttctatcagtggatgaaccctagaaccattgtagc tgtagacactgcggagaaaattcacgtcatcgatgtcaggtctgaagaagagctagagtggatgaaccctagaaccattg tagctgtagacactgcggagaaaattcacgtcatcgatgtcaggtctgaagaagagctagagaagattgatatatctgat gtacagcttgtctacaataacagtcatttcaaatccttagctactggaggaaatgtcagccaagctctggcatttgctgg tgagagagcgtgttatcagaccatcgttagtcacagtggacaactccttatactcggtactaagactgtgtatgtgtata acctgaggacatggagagatgtgagtataactcgtgttatcagaccattgttagtcatagtggacaactacttatactcg agaattgaggttttggtgaggcaggagaagtatcatgatgctttagctctgtcgttgtcgttttatgagaatcgtgccaa aggtattgttggacttactggatcgtctcgacagaaacgggagctggtagctgacttgatgttagaccttctatttgatt atgtggatctgtccatgaccaagctgtgtccagaaaaaggtaaaatggaggagttagaggagtattatcagggtattgta ccagtctgtgtggattactgcctacacttagatagaacggatatactgtttggcagaatctatgagagattcggagagga tgtgattgccaaggggacgtttctggagtgtttagagccgtacattatgagcgacaaacttacgtcaattccaccgttag tgatgaaggattttgttacgcattacgaaaatcgttgtatgctggagagtgtagaagcctgtatagttcacctggacgtc acatcactagatattcatcaggttgtaagtttgtgttggggacatggattatatgatgctataatctatgtgtataacaa aggcatgcaggactacactactccgctagaagaactgctgggaacccttcaggctgccatagaaacgggtaaacaactga cggacagccaaatcaagctgggaaacaaacttcttgtctatatcagttgttgtttggcgggccgagcttatcctctcgga gacattcctgaagaatctgtagagatggtcaaaaacagtgtgtttgattgcgtaacgtcacttcatcgcaggcatagatc agctgaggagcaagcttatccatacctgaggacgttattgcagtttgacactcgggaattcctcaatgtgttggctttgg ctttcgaagaagaagagtttaacacagatgaagggaggaagaaaagacagagagttgttgacatcctgttacaggtcatg gtggagagtgtgggatttactccaacacaggttggagttttgttcactttcctggctcggcagatggctcgccatgagaa cactatactggtgaacagagttctgtttgagcaggtactggagtttctcgccaacccagatgacgagtcaaggcatgagg agagacagcaggccttactggagttattacacgctggaggtctgcagcaaatagatgaggaaaaattactgtcgctggca gagaatgctaaattttaccgtgtctgtgagattttgtacgagaaaagacgtcagtttgacaaaattctgtcatgttacct cagggactatgccagaaagtaccatgcattcagctatattggtagtatactgaacagcgagttattctcagacattgaga aggccaggcttaaagaggaagcgcttgatcatttacaggaccttgtatctatagattgtaagcaggcagcccagatggtg atttctagcttcagttctaacctcagtgatatcgtacaccaactacagggcaatcagcaagtcctatttgagttcctaca aggtgttatgtcttataaagattcaatggggagtgccattcaccaagagaaacagatcaatgtcgagcctcgtattgtgg agctatttatagaactgatggcgcaattcaaacctgccgaagtgcataattttatcaaaatgaatgagggatatagaata gaacaaacccttgagatctgtaggaaatacaaattagatgatgccactgcgtttttattggagaaggctggtgacgtaca aggagcattctccataatgcttgagattttacagcagaaaatgagacagctaacagaagctttactcaaagaacaatctg actcagagtataagatgctgttttttgaggtggacaccaaagttcttgtggtgattcaactttgtcagaggaactctgga aaaatggacgaaaaaggcagagagttgctatggtttcctttgctggaggctgtgatgtcacctcaaagaaagctgaaaga tgtagaaaataaagaaatacaagatgatttcaaaagtatcacccaccatgttttaaacagtatgatgggatacatagcat taccggcaattctacagaaaataatgcaggacccggcatacagcacagggaagtttggtgaagtcagagagctcatactg ggaatgctggaaacttataattatgaagagggtaaaactccagatttcatcaaaattttctgcaattgtcatttgcgaaa attccccccagcgaaaataacgatgtttacagtaactacactgatggtgacatgtaaaaacctactgaaccacgatatac atcaacatctacgtagcctgacatgtgctgctgccaagggctatatacccaagggagagaactgtaatctctgtaataaa cagtttgtcagtcagatggattcagacacagtcgttgttttcagatgtggccatagttatcacataggttgtttacgatc ggtgggttccgttcacgtgatcgacaaggaggaacattgggcatgttacttgtgcagtcatagtaaacgtaatcagatcc agagttctcgatttcatcgaagtctgtctaatcccaaacaagtggcacaaaaaaccttggcagagaaaagtaaagggcta tcattggatgcccagcacacacaggctgtagactatgtcaggaaattccttaaaactccctctcgggtgcgtctctcagc atacaagaacaacatagaagtggcatacatagtctttgacagtatggggaagaccaaaaacgaatggctggactgcgccg atattatcgattcatcttacactgatgtggcgtcggcgacacgcaactactgtgaaatgacagggagcaccagtacctta agtcgacatttctttgtaaacaacgagtatgacggctgccctaacgacaaaggttggttcgtccttaaggactacaatgc gcagcagggatgcgcggagtgggatgtcgtcaccgcccaaccctacttcctgtactctgccgactctaccaaggtcacgt ggtcaactggtaataagcaaacagccgacacaatggttgtctctgtaatggcatgggacatggtgtttaagggggtacag ggcgtggtccctccccagggtggattacgtcagctatggcaaggaactgataccctcaataacaacaacccctccgctca aacgctcaccaggagtcctagccttgtttacaaatcaatcaatgtggaaaaatggcagagtgtcccgggattcttcattg aaagcgtaaaatatgctatgttcaataacggtaaggaggtaggattcagcatttacgacggtcgtgacaccgacaaaaac gggtggtttgttgatgctaggatcctctattcaagatggaccgatattaaaggttataccaaagtcgggtcttctattga tggagacaatattcgacgatttgctttatggaaggaacacggaggttgtcccaacgataaagcgtggatggccatcttgg attcctccgacaacgggtttcactgtacttgggacagactgtcgacctctcatagcatttcccgtccatattttctctac agcaacaaacgtacctgggccttgtgtgaaagcaatagcgcatggaatagcgcggaatttcccacagcagaaacactagc catattcattaaaggatggagaatggtgatgaaagtagcccatggtcagtctgtgtctccggcctccggtgtctacaacc tctggaccggaacctataccgtcaacgagttcgattcgaacgctctcaccatagcatcgggtacgaagacctacaagtca agcgtggtggattcatggaataacaatcatcatatttcagcggttcgtataggattttataagaacggtgccgaacaagc gtacgtggtattcgacgcccacggctcggacaaaaacaactggtttgactgtaacaggatcctctatactagcttctcag atctcaataggaataccgggaccagtcactgtagtgtcgttggggactccggccatagtcgtcgctttttcttggagaag tcatacggtggttgcggtggggacaatggttggttcacggtggtggagggtaccgcctgtgcgtgggaacagaaaacgtc acgcccatattttgcctacacctcttccggcagttctcaagttaacgacaaccacgtgactgctgacgtgttcctcgtat cagttgtaatggataattgcaatccgaatccatgtcagaacggcggtacctgctacgacgagggaatggactttacatgc acgtgcagcggaagttggatcggagagagatgcgcagacctgaacggcggttggtcgaactggggatcatgggcgggatg ctccgccacgtgcggcccgggtacatggtcgcgcacgcgcacctgtacaaatccatcacccgtgggtgctgggtcgtcat gctccggtggatcatcacagagtactgggtgtaatcttggtgtatgcattccggacattgatggaggttggggtaactgg ggatcatggtcaagctgtccggtgacctgtgggactggacagaggactcggaccaggaactgtgacaaccccgcccagtc tggcaagggtcaagactgccaggggccatacagcgatgcgcttacttgtactctatcaccgtgtgcagtcgacggtgcat ggggagactggacagcctggacgacatgtactaaaacatgtggaacagggaaacaggtccgttctcgtgcctgtaacaat ccagcggcggcgtacggtggagtaccatgcacaggagataccagtcaaacattggactgcaatacacagggatgtccagg ttgtggtacaggaatgtatctatgtacggacggaacctgcgccatcggcgggcgatgtgacggagtcaccatgtgccctg acggaagtgacgaagccggctgctcacaggctgttctatcgttgtcactcggctacacaaataacaacttacagcgtcct gatccagaagaagcaggcggtaccagtatgattggttgtggtacaggaatgtatctatgtacggacggaacctgcgccat cggcgggcgatgtgacggagtcaccatgtgccctgacggaagtgacgaagccggctgctcacaggctgttctatcgttgt cactcggctacacaaataacaacttacagcgtcctgatccagaagaagcaggcggtaccagtatgattggttcttctctc ttacttttgctgcttgctgctgtatttggacgtttaatggcgaggtga |
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Protein
| Protein ID | pfu_aug2.0_787.1_24410.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_787.1_24410.t1 FTDSPVLAVCSDSGGSVFELEFNRGEVCAIEPLHMNYTIKDHPMQDVMLVAMATLSKGSGNTLPLLAWQFVIIQVSEKDR VIDPVLAFARESTIFFYQWMNPRTIVAVDTAEKIHVIDVRSEEELEWMNPRTIVAVDTAEKIHVIDVRSEEELEKIDISD VQLVYNNSHFKSLATGGNVSQALAFAGERACYQTIVSHSGQLLILGTKTVYVYNLRTWRDVSITRVIRPLLVIVDNYLYS RIEVLVRQEKYHDALALSLSFYENRAKGIVGLTGSSRQKRELVADLMLDLLFDYVDLSMTKLCPEKGKMEELEEYYQGIV PVCVDYCLHLDRTDILFGRIYERFGEDVIAKGTFLECLEPYIMSDKLTSIPPLVMKDFVTHYENRCMLESVEACIVHLDV TSLDIHQVVSLCWGHGLYDAIIYVYNKGMQDYTTPLEELLGTLQAAIETGKQLTDSQIKLGNKLLVYISCCLAGRAYPLG DIPEESVEMVKNSVFDCVTSLHRRHRSAEEQAYPYLRTLLQFDTREFLNVLALAFEEEEFNTDEGRKKRQRVVDILLQVM VESVGFTPTQVGVLFTFLARQMARHENTILVNRVLFEQVLEFLANPDDESRHEERQQALLELLHAGGLQQIDEEKLLSLA ENAKFYRVCEILYEKRRQFDKILSCYLRDYARKYHAFSYIGSILNSELFSDIEKARLKEEALDHLQDLVSIDCKQAAQMV ISSFSSNLSDIVHQLQGNQQVLFEFLQGVMSYKDSMGSAIHQEKQINVEPRIVELFIELMAQFKPAEVHNFIKMNEGYRI EQTLEICRKYKLDDATAFLLEKAGDVQGAFSIMLEILQQKMRQLTEALLKEQSDSEYKMLFFEVDTKVLVVIQLCQRNSG KMDEKGRELLWFPLLEAVMSPQRKLKDVENKEIQDDFKSITHHVLNSMMGYIALPAILQKIMQDPAYSTGKFGEVRELIL GMLETYNYEEGKTPDFIKIFCNCHLRKFPPAKITMFTVTTLMVTCKNLLNHDIHQHLRSLTCAAAKGYIPKGENCNLCNK QFVSQMDSDTVVVFRCGHSYHIGCLRSVGSVHVIDKEEHWACYLCSHSKRNQIQSSRFHRSLSNPKQVAQKTLAEKSKGL SLDAQHTQAVDYVRKFLKTPSRVRLSAYKNNIEVAYIVFDSMGKTKNEWLDCADIIDSSYTDVASATRNYCEMTGSTSTL SRHFFVNNEYDGCPNDKGWFVLKDYNAQQGCAEWDVVTAQPYFLYSADSTKVTWSTGNKQTADTMVVSVMAWDMVFKGVQ GVVPPQGGLRQLWQGTDTLNNNNPSAQTLTRSPSLVYKSINVEKWQSVPGFFIESVKYAMFNNGKEVGFSIYDGRDTDKN GWFVDARILYSRWTDIKGYTKVGSSIDGDNIRRFALWKEHGGCPNDKAWMAILDSSDNGFHCTWDRLSTSHSISRPYFLY SNKRTWALCESNSAWNSAEFPTAETLAIFIKGWRMVMKVAHGQSVSPASGVYNLWTGTYTVNEFDSNALTIASGTKTYKS SVVDSWNNNHHISAVRIGFYKNGAEQAYVVFDAHGSDKNNWFDCNRILYTSFSDLNRNTGTSHCSVVGDSGHSRRFFLEK SYGGCGGDNGWFTVVEGTACAWEQKTSRPYFAYTSSGSSQVNDNHVTADVFLVSVVMDNCNPNPCQNGGTCYDEGMDFTC TCSGSWIGERCADLNGGWSNWGSWAGCSATCGPGTWSRTRTCTNPSPVGAGSSCSGGSSQSTGCNLGVCIPDIDGGWGNW GSWSSCPVTCGTGQRTRTRNCDNPAQSGKGQDCQGPYSDALTCTLSPCAVDGAWGDWTAWTTCTKTCGTGKQVRSRACNN PAAAYGGVPCTGDTSQTLDCNTQGCPGCGTGMYLCTDGTCAIGGRCDGVTMCPDGSDEAGCSQAVLSLSLGYTNNNLQRP DPEEAGGTSMIGCGTGMYLCTDGTCAIGGRCDGVTMCPDGSDEAGCSQAVLSLSLGYTNNNLQRPDPEEAGGTSMIGSSL LLLLLAAVFGRLMAR |
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