Gene
| Gene Model ID | pfu_aug2.0_788.1_27778 |
|---|---|
| Locus | scaffold788.1 : 41165 ... 60485 : - |
| To GenomeBrowser | scaffold788.1:41165..60485 |
| Genes list of scaffold | scaffold788.1 |
| Synonym | pfu_aug1.0_8029.1_60355 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_788.1_27778.t1 | 2 | 1 | HgmA | 8 | 106 | 0.0 | 593.0 | 2.6e-38 | 3.9e-34 | 117.7 |
| pfu_aug2.0_788.1_27778.t1 | 2 | 2 | HgmA | 115 | 403 | 0.0 | 593.0 | 0.0 | 0.0 | 475.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_788.1_27778.t1 | gi|524868787|ref|XP_005091193.1| | PREDICTED: homogentisate 1,2-dioxygenase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_788.1_27778.t1 | gi|676461550|ref|XP_009055979.1| | hypothetical protein LOTGIDRAFT_189917 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_788.1_27778.t1 | gi|698407428|ref|XP_009810387.1| | PREDICTED: LOW QUALITY PROTEIN: homogentisate 1,2-dioxygenase [Gavia stellata] | 0.0 |
| pfu_aug2.0_788.1_27778.t1 | gi|524981052|ref|XP_005038556.1| | PREDICTED: homogentisate 1,2-dioxygenase [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_788.1_27778.t1 | gi|260823400|ref|XP_002604171.1| | hypothetical protein BRAFLDRAFT_73486 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_788.1_27778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_788.1_27778.t1 atggcatttaagcagttggattatatgtcaggatttgggaatgagtttgcaacagaggatcccagatgtccaggagcgtt accccagggacagaacaaccccaagaaatgtccgtacgatctgtatgcggaacaattgtcaggatcagcttttacatgtc caagggaaactaataaacgaagctggttatataggatcagaccatcagttttacatcagccatttaaaagactggaagag aaaactctgataactcataaatgggaggaagatcatccaaaccctaatcagttaaaagtaaaatcttgtgatgtcgggtc ttcggatgtgttaaatgcaagtcaactgcagtgcctttacaactcagatggagattttctcattgtccctcagcaaggca ctctacttgtaaccacagagtttggaaaaatgagggtggatcaaaatgaaatctgtgttattcagcaaggtatgaggttc aatatagaggttgagggagattccagaggttacgtcctcgaggtatttgatggacatttcacattgccgaacttgggacc gataggtgctaatggtttagcgaaccctcgggattttgagactccagttgcttggtatgaggacagagatgtcgctagct acgaggtcatcagtaaatatcaaggtcatctcttcattgcatgtcagaaacattccccgtttgatgtggtagcctggcat gggaattatgcaccatataaatacaacctgagtaactttgttactgtaaatacagtctctgtggatcacatggatccgtc tattttcacagtattaacatgtcagtccttaagacctggagttgccattgcagattttgtgatatttcctcctagatggg gtgtagctgataaaacattccggccgccctattaccatagaaattgtatgagtgaattcatgggccttattcatggttct tatgaagcaaaggaggaagggtttcgtccaggtggttgcacactccacagtatgatgacaccacacggcccagatgccga ctgctttgaaaaggcttcaaatgccgagcttaaaccacaaagagtggcagataataccatggcatttatgtttgagtcat ccctaagtatggccattacaccgtggggaaaccagaataaagtggatgataagtatttcacatgttggcaacccctcaag aaacatttcaatggtgccattaaaagatctagcagtcaactcacaaacgatacagcttctcctaaaacaaagaagatgaa aggcaaataa |
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Protein
| Protein ID | pfu_aug2.0_788.1_27778.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_788.1_27778.t1 MAFKQLDYMSGFGNEFATEDPRCPGALPQGQNNPKKCPYDLYAEQLSGSAFTCPRETNKRSWLYRIRPSVLHQPFKRLEE KTLITHKWEEDHPNPNQLKVKSCDVGSSDVLNASQLQCLYNSDGDFLIVPQQGTLLVTTEFGKMRVDQNEICVIQQGMRF NIEVEGDSRGYVLEVFDGHFTLPNLGPIGANGLANPRDFETPVAWYEDRDVASYEVISKYQGHLFIACQKHSPFDVVAWH GNYAPYKYNLSNFVTVNTVSVDHMDPSIFTVLTCQSLRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIHGS YEAKEEGFRPGGCTLHSMMTPHGPDADCFEKASNAELKPQRVADNTMAFMFESSLSMAITPWGNQNKVDDKYFTCWQPLK KHFNGAIKRSSSQLTNDTASPKTKKMKGK |
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