Gene
| Gene Model ID | pfu_aug2.0_788.1_27783 |
|---|---|
| Locus | scaffold788.1 : 161946 ... 179099 : + |
| To GenomeBrowser | scaffold788.1:161946..179099 |
| Genes list of scaffold | scaffold788.1 |
| Synonym | pfu_aug1.0_3037.1_16009 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_788.1_27783.t1 | 1 | 1 | Exo_endo_phos | 164 | 382 | 2.3e-17 | 63.7 | 7.3e-20 | 3.6e-16 | 59.8 |
| pfu_aug2.0_788.1_27783.t1 | 1 | 1 | Exo_endo_phos_2 | 263 | 385 | 3.5e-09 | 36.3 | 1.4e-12 | 6.8e-09 | 35.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_788.1_27783.t1 | gi|676481394|ref|XP_009062361.1| | hypothetical protein LOTGIDRAFT_128104 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_788.1_27783.t1 | gi|524889396|ref|XP_005101256.1| | PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_788.1_27783.t1 | gi|291222020|ref|XP_002731016.1| | PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_788.1_27783.t1 | gi|260808574|ref|XP_002599082.1| | hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_788.1_27783.t1 | gi|557329730|ref|XP_006037764.1| | PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform X2 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_788.1_27783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_788.1_27783.t1 atgcgcattgcgtcgagtttgaatggattccgaaagtttgacgagacgactttccatcacccacgcaacccgaattgtct tccatccaaactggcgggaacaatctcaaaacaaatttttgcacggcaagcatttcatatttcctcgaggttcttcacaa aattattggaaaatttcagctatcaaaggccaaatacagtacatttgcacacatcctgttgtttgtctgcgatgccacca aagcgaaaggctgccaagggcaaagggaaaactgatgaggagacagtatcaaaaaaagcaaaggtagaggatgaaccaac agaggagccagaaaaaccaaagaagggtaaaggaaaagggaaagcggctgccaaaccaaagaaagaagcgagtgtggaga gcctgccagatgatgcagatacatccttccctactgaagttaatccagactgtaaaaccccagacggtagaaagccgaca ataaaaatagcatcatggaacgtaaatgggatcagagcctggtctgagaaagacaaaatgaagtacctgaatgaagtcaa gccagacattctttgtatacaagaaacaaagtgtaaggagaacgaaattcccgatagcgtcaaacataaagattataaaa cttactggtcatcggcagagcaagctggatacgctggtacaggactctataccaaacagaagcccataaatgtaacgtat ggattagatgtgccaaatgctggaaaaggtcttgtaaggttaaactatcgccacaaggaatgggacgtggcatttacaga ccatctgaagaaactagacgctaaaaaacctgtcataatgtgcggggacctcaacgttgctcataaagaaatagatctca agaatcccaaatcaaataagaacaagacagctgggttcacagaccaggaacgacaaggttttaccgatctcctggatgca gggtttgtggactcgttcagatttctgtatcctaatgccagggaatgctggtcattctggtcatatatgatgaacgctag ggccaaaaacattggatggagactggactattttgtaatatcagagaggttgaaggcagatctatgtgacagtattatac aacagtcctatatgggcagtgaccactgtccgatcatgctattgatgtcattcaaatag |
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Protein
| Protein ID | pfu_aug2.0_788.1_27783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_788.1_27783.t1 MRIASSLNGFRKFDETTFHHPRNPNCLPSKLAGTISKQIFARQAFHISSRFFTKLLENFSYQRPNTVHLHTSCCLSAMPP KRKAAKGKGKTDEETVSKKAKVEDEPTEEPEKPKKGKGKGKAAAKPKKEASVESLPDDADTSFPTEVNPDCKTPDGRKPT IKIASWNVNGIRAWSEKDKMKYLNEVKPDILCIQETKCKENEIPDSVKHKDYKTYWSSAEQAGYAGTGLYTKQKPINVTY GLDVPNAGKGLVRLNYRHKEWDVAFTDHLKKLDAKKPVIMCGDLNVAHKEIDLKNPKSNKNKTAGFTDQERQGFTDLLDA GFVDSFRFLYPNARECWSFWSYMMNARAKNIGWRLDYFVISERLKADLCDSIIQQSYMGSDHCPIMLLMSFK |
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