Gene
| Gene Model ID | pfu_aug2.0_789.1_31158 |
|---|---|
| Locus | scaffold789.1 : 67516 ... 108150 : + |
| To GenomeBrowser | scaffold789.1:67516..108150 |
| Genes list of scaffold | scaffold789.1 |
| Synonym | pfu_aug1.0_6074.1_52698 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_789.1_31158.t1 | 2 | 1 | SEA | 158 | 264 | 2.7e-15 | 55.9 | 6.0e-18 | 1.1e-14 | 53.9 |
| pfu_aug2.0_789.1_31158.t1 | 2 | 1 | Trypsin | 305 | 343 | 0.0 | 178.8 | 4.6 | 8500.0 | -4.0 |
| pfu_aug2.0_789.1_31158.t1 | 4 | 1 | MAM | 306 | 374 | 0.0 | 210.8 | 3.1 | 5800.0 | -3.1 |
| pfu_aug2.0_789.1_31158.t1 | 2 | 1 | SRCR_2 | 319 | 349 | 2.1e-12 | 47.1 | 4.7 | 8700.0 | -3.0 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 1 | Fz | 406 | 488 | 3.9e-24 | 85.2 | 5.1e-10 | 9.5e-07 | 29.1 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 1 | EGF | 470 | 481 | 4.3e-11 | 42.5 | 0.77 | 1400.0 | -0.7 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 2 | Fz | 530 | 612 | 3.9e-24 | 85.2 | 8.0e-10 | 1.5e-06 | 28.5 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 2 | EGF | 594 | 605 | 4.3e-11 | 42.5 | 0.58 | 1100.0 | -0.3 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 3 | Fz | 654 | 738 | 3.9e-24 | 85.2 | 7.3e-10 | 1.3e-06 | 28.6 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 3 | EGF | 718 | 729 | 4.3e-11 | 42.5 | 1.1 | 2100.0 | -1.3 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 4 | EGF | 779 | 812 | 4.3e-11 | 42.5 | 2.2e-09 | 4.0e-06 | 26.6 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 1 | Ldl_recept_a | 785 | 794 | 1.7e-29 | 101.4 | 8.0 | 15000.0 | -5.6 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 5 | EGF | 929 | 962 | 4.3e-11 | 42.5 | 4.0e-11 | 7.4e-08 | 32.2 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 4 | Fz | 973 | 1071 | 3.9e-24 | 85.2 | 2.2e-14 | 4.0e-11 | 43.2 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 2 | Ldl_recept_a | 1173 | 1209 | 1.7e-29 | 101.4 | 1.6e-10 | 3.0e-07 | 30.2 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 6 | EGF | 1178 | 1191 | 4.3e-11 | 42.5 | 1.5 | 2700.0 | -1.6 |
| pfu_aug2.0_789.1_31158.t1 | 2 | 2 | SRCR_2 | 1218 | 1308 | 2.1e-12 | 47.1 | 1.1e-15 | 2.1e-12 | 47.1 |
| pfu_aug2.0_789.1_31158.t1 | 2 | 2 | Trypsin | 1319 | 1554 | 0.0 | 178.8 | 0.0 | 0.0 | 178.8 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 3 | Ldl_recept_a | 1561 | 1591 | 1.7e-29 | 101.4 | 3.7e-06 | 0.0068 | 16.2 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 7 | EGF | 1564 | 1577 | 4.3e-11 | 42.5 | 0.58 | 1100.0 | -0.3 |
| pfu_aug2.0_789.1_31158.t1 | 4 | 2 | MAM | 1599 | 1753 | 0.0 | 210.8 | 1.9e-18 | 3.5e-15 | 56.1 |
| pfu_aug2.0_789.1_31158.t1 | 2 | 2 | SEA | 1639 | 1663 | 2.7e-15 | 55.9 | 5.1 | 9500.0 | -3.7 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 4 | Ldl_recept_a | 1757 | 1797 | 1.7e-29 | 101.4 | 0.13 | 240.0 | 1.7 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 5 | Fz | 1757 | 1797 | 3.9e-24 | 85.2 | 8.0 | 15000.0 | -8.1 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 8 | EGF | 1797 | 1806 | 4.3e-11 | 42.5 | 7.8 | 14000.0 | -3.9 |
| pfu_aug2.0_789.1_31158.t1 | 4 | 3 | MAM | 1806 | 1968 | 0.0 | 210.8 | 5.0e-19 | 9.3e-16 | 58.0 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 5 | Ldl_recept_a | 1972 | 2007 | 1.7e-29 | 101.4 | 2.1e-06 | 0.0039 | 17.0 |
| pfu_aug2.0_789.1_31158.t1 | 6 | 6 | Fz | 1997 | 2009 | 3.9e-24 | 85.2 | 8.0 | 15000.0 | -9.8 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 6 | Ldl_recept_a | 2009 | 2042 | 1.7e-29 | 101.4 | 1.1e-11 | 2.0e-08 | 34.0 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 9 | EGF | 2015 | 2022 | 4.3e-11 | 42.5 | 7.1 | 13000.0 | -3.8 |
| pfu_aug2.0_789.1_31158.t1 | 4 | 4 | MAM | 2052 | 2221 | 0.0 | 210.8 | 3.4e-33 | 6.4e-30 | 104.0 |
| pfu_aug2.0_789.1_31158.t1 | 7 | 7 | Ldl_recept_a | 2240 | 2276 | 1.7e-29 | 101.4 | 1.5e-13 | 2.7e-10 | 39.9 |
| pfu_aug2.0_789.1_31158.t1 | 10 | 10 | EGF | 2242 | 2254 | 4.3e-11 | 42.5 | 5.4 | 10000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_789.1_31158.t1 | gi|524889712|ref|XP_005101410.1| | PREDICTED: MAM and LDL-receptor class A domain-containing protein C10orf112-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_789.1_31158.t1 | gi|676486631|ref|XP_009064037.1| | hypothetical protein LOTGIDRAFT_95390, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_789.1_31158.t1 | gi|597799025|ref|XP_007261050.1| | PREDICTED: transmembrane protease serine 13-like isoform X2 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_789.1_31158.t1 | gi|597799023|ref|XP_007261049.1| | PREDICTED: transmembrane protease serine 13-like isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_789.1_31158.t1 | gi|573909261|ref|XP_006642349.1| | PREDICTED: transmembrane protease serine 5-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_789.1_31158.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_789.1_31158.t1 atgggtgataccgaccgaggtgatggaaataaacgtagaaaactttcacgctcagtaagcgggtcacacgacgtcagaaa taggaaatacaaagtaagtgacacaactacgccatcgccttcggaagaaaacaaagaattttcacaaggattttatagac agaatttaacatattcgtcagattttgtggacggacccccagttagtgccaagaaacaatcacccggggtggataatgaa gcgtatcaacatgatgatgatgtgtttacactcacaagatctccaccaaaatttgaacataggacttctccaagaacttg gcgggaagagagtgcgcgaagtgttgatgagaaaaaacaaacatcttgggataggagggggttaatagttttaggggttg tgacaattttagcaattttagccgctgcagctgtgatactttatttcaaagttttcaaagaagatgctcctgtgataatt tttggcagcttatctttatacaatgtatggaataatgatctcaataattcatcatcgttattatacaaagataccgcatc caactttactgctgagatggatgccgtttttaaaagttcaaacacatcggagatatacctgggtacaaatgtgctgttct ttagcccaggcagtgttgttgttcactttgatctttcatttggtccctcatattcatctatattccttgatgtgaatgaa ctttcaaaccttgctcaaaatgaaataaaagttaaagcggaaaataaggatactagtcttcagattaatccttcatcagt caatataacagttaaaagatttacaacgcctattcctgctgttacaacaacgattaaatcttcaacgaaaacatctccac caccctcggaatcaacaacagcagaaagagacatgacacaaagtacaactactcaaactacaagacaaccaaccagtgct gcacaatctacaacaagtacaacacaatcaacaacaacaacagcaaccacttctacaacgacatcaggggaaataaccag gatgtcaacttcatctgctacaacaccccaagccattcatgatgagtgtccaggcttgccattggctaatacccagtatt gtaatcagcttccctccactaattgtgtcagtatatccacttcttcatccacttcgaaattgaccacacccgccacaaca ccaaaagcagataattgcctagccctaaacatacaagagtgtgctaactttggacagacagacaccattttccctaatgt gtttaatctgactagtgtccagcaagcttcagcgtacttctatacgtataacaatacagtgtgtaatgaccgtacactca gctacctttgtacattgatgtatccacgctgtattaatggtgctccacagttaccatgccaacaattctgcctcagtgtc caacaggaatgtccatcatttgtattggctgattcccagtactgtagtctattaccaacaaacaactgtttcactccttt gcctccagcatcaaccactacacttcagacttcaactgtatcaacaactacagttaaggcagataattgcctagccctaa atataccagagtgtgctaactttggacagacagacaccattttccctaacatgtttaatctgaccagtgtccagcaagct tcagcgtacttctatacgtataacaatacagtgtgtaatgaccgtactctcagctacctttgtacattgatgtatccacg ctgtattaatggtgctccgcagttaccatgccaacaattctgcctcaatgtgcaacaggaatgtccatcatttgtactcg ctgattcccagtactgcagtctgttaccaacaaacaactgtttcactccttctgtacaagtatcaacaactacacttctg accacaactgtatcaacaactacaattaaggcagataattgctttgccctaaacgtaccagagtgtgctaactttggaca gacagacaccattttccctaacgtgtttaatctgaccagtgtccagcaagcttcagcgtacttctatacgtataacaata ccgtgtgtaatgaccgtacactcagctacctttgtacattgatgtatccacgctgtgttaatggtgctccacagttacca tgccaacaattctgcttaagtgtccaacaggaatgtccatcatttgtacttgctgattcacagtactgcagtctgttacc aacaaccaactgtttctctccatctgtacaagtatcaactactacaatgctgacgacaactccgacaacgactacggtta tagcagatacatactgtttcctgatgatgccatgtcagaatgggggtacgtgtgtagatcagaacggaggggtcgactat tattgtcaatgtcaactaggttttacaggaagaaactgtgacacactaggagctttggtaaaactgcgagaatgtaacaa agtaatatcaggtcaccttagacaatgtaaattagctgaaaagtcgtttccaagcgaagcagagttattgagctgtagag ctggtatttggaagtggaaaaaagaaacagatcgtggcaccacggtgtgtccattccataggtacaactacggaatagga ttgaggccaagtatgaaatgcgggttccccaatcacccagtggattcgaggtgcaaaccacaaagaggcatgacagctgc tatgtgtgaagtggcccaattgagatggggttttctttgcagagttggaacaggagactcatactgttttctgatgtcac cgtgtaagaacggcggtacgtgtgttaacacagacggtggggccgggtattactgtcagtgccagcaagggtacacagga aggaactgtgataatctagttacgaccctgccaccttgtgtacaagccacggttcctgaatgtcggaatttaaatgtcac ggacatcatatttcctaacgtatttggtatacccaatgaagcagcgtccattccatacttcacccagtacagaggacagt cctgctcagagaatagcacatatttcttgtgtaatattctctttcccaaatgtgagaatggaaggagtatccgcccatgt aagagcttctgtgaggaagtcaaatcaaattgttcaggacttcaaataatgcaagctgtaccatgtgaccaactcacgga tacagattgtgttagctccctccctccacctgtgaaagatgatagaccagtggctaatgcaggaccagatgtatacctga ctccacctaccagctctgccatactaaatgggaatctaagtactgatgacatgggtatcattagttatgtttgggccaaa tctcctgatcacgctcagattgttgacatggagggtgttgcaacaccatatctcaaggtatctaatcttggtatgggtga ctataagttcatactgactgtaacggacactaggggacagaactcctctgatggcatttatgtgtatgtcagacaagaat gttcatccagtaaccaggaaagatgtcctaacggtaaatgtatcatgacagaatggttgtgtgatggttcagatgactgt acggatggatgggatgaaagtaactgtatgagagtgaacaataacttagacattttggagatgccatatggagatttaca cacttacctccctttgtgttacgatagctggtctgagtctatggggaccaatgtttgtgagaaattgggaatgagaagtt acattacatcaaagagagttgcatttgccatttctcagtacgtggctgtggattctgtaaatggagtagtcaattcatac gtagggaaattgtcgttaagaaacagttgtcctaacaatgaagttgtttctgtgcagtgccaaccaagtgaatgtggtca gaggaaggttggaccatcaatggtacagtatgtcataaacggttatgatgccagtccaggtgattggccttggcaggttt caatacaaatacaaattggcgacaaatttcgacatatctgtggaggaacactcatcagcagagattttgtcctgtctgca gctcattgtacactaaaatacatagtgcagttgataaggatgagagtcgttctgggagccacaaacaggggtacgccaga agtcacccagaagattgtagggataaaacggcagatcaaatatgacgagtcctacacggagtacggccctggtgatatat tactgtacgagcttgaggagacagtaccgtacacaccctatatccagcctctgtgtctgcctgatgaagaaaataagttc tacaaatcttcggagtgctatgctacaggctggggatacacaagtccaggctctggagaccacaccacacttctccagga attaaagatgaagctatggaccatatcagactgtaatagtcctatagcatggaatgatactgtaacatcagggtacctgt gtgctgggtacagatcaggcatcagatctgtttgtacgggtgacagtggaggaccattacaatgtaaagataactcagga atttggaggctggtcggaatctctagttatgttgctccaaattgtagtggcacgaataaacctaatgtatttactgacgt aatgcagtacacaagctggatcagaaatgagacaagatgtaaatttatatgtgacaatgggaagtgcctgtacgaccaga ccatgatatgtaatcgccatgacgactgtggtgataattcagacgaggtccgactctgcactgtgtctgcaaattgtacg tttgatgacccgtttttgtgtgggtataagttttctgagatgcagtggtcatctggtccagaaaacagccaatcagctgc cactataccttggtcagaccacaccattggtcattaccctggaaaattcatggttggaaagactttgaattttgacacaa acattggaaatttgacttcaccgaggtttatcggtatatcccaactctgtgtccgtttctactacaacattagagggacg ctttttgatcggcttcggatttccgcacatgagtacagctccagtggctcgttagtcagcacgcggcaggtttggaactc gataaacggtgagatacaagacatgtggagacttgggtactttgaccttgctgccggaacctatgctttatcgtttgtga tgagtgatactgagagagttgccattgatgatgtttttgttcagcatggaatgtgtgatcaatatgtgtgcaaaagggaa gagaacaagtgtgtaacatctcattctcctgatgtgacggattctgtttgtctacctcaaagttcaatctgtaacgttgt cagggagtgcaacaaagatgaagtaaactgtcaagtgaacaataccagatatttctgtgattttgaaagtgcaatggatt gtgggatatcacaagtcaccaatgacaaaggggaatggttgttaaagaaccagacttcactcacaaagagttttttctct gatgccttctctgatcacacaacgggctcctcatctggtttgatgtttttcctattcacctaccagctggttagcaatgg caataacgtggttatgacacaaaacctggctctacataaccgagaacactgtcttaccttctactacagaggtcttactg aaatgactttcaagatacatattgagtcccagggagtacaatatgacctatggagctttgccaatagaaacatatcatgg tgggccaaggctcaggtacagttacctgcccttgacaaatctctgctgacgtatgaagtggtgcgacttagtaagaaagt tcacgactactacctaccacacttggctctcgatgatatagaattcttaccaggacaatgtacttcttatgtttgtccag atggttatatgaagtgtgcgacagagaatttctgttatcccgctgactggagatgtgacaggacaatccactgtagtgac gagtcagatgaggctctatgtgattgcactgctagcgagttttcttgtggaaatggcagatgtatagaacagaaattgac atgtgacaaaaattttgattgcttagacaaatcagatgaaggaactatctgtgagcctttgaagaatgtatcctgcgact ttgattctccgtttatgtgtgggtatactgtcaatgagacactcggtgaaacagactttaggtggatccgtcagaatggt ccgactccatctacttttactggtccactcaatgatcacacacaaggcaactcaagtggatattacgtgtatgcagaagg tagtcatggtcaggaaggagagtatgcctatataacgtccgttccttttactacttctgtaaatcagagtctaacatttt attaccatatttacgttgaaaggccagatgttgtgaccgaaggtttggcagttgtagcaaaatataatgattctgtgagc aacgagttatggtggcggaactcgtctaccggcaatgtatggacctatgcctgtattgatcttgtaccgaacaaaaattt acagattgtttttgtagccaggaaacaaataccgagcattgtgggtaattacgatgctgatgtggctgtggatgacgtcc ttctacagaaccaaatgtgtgcaggtactgtaccatcaacaacaactccctcacctgtccctaccatcacttcaacacca ggatgtgcccccaatgagttcaggtgtctggatggtccatgtataagggcagagttacgatgtgatggtatctctgattg ttttgattcatcggatgaagacaactgcccttcatga |
|
Protein
| Protein ID | pfu_aug2.0_789.1_31158.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_789.1_31158.t1 MGDTDRGDGNKRRKLSRSVSGSHDVRNRKYKVSDTTTPSPSEENKEFSQGFYRQNLTYSSDFVDGPPVSAKKQSPGVDNE AYQHDDDVFTLTRSPPKFEHRTSPRTWREESARSVDEKKQTSWDRRGLIVLGVVTILAILAAAAVILYFKVFKEDAPVII FGSLSLYNVWNNDLNNSSSLLYKDTASNFTAEMDAVFKSSNTSEIYLGTNVLFFSPGSVVVHFDLSFGPSYSSIFLDVNE LSNLAQNEIKVKAENKDTSLQINPSSVNITVKRFTTPIPAVTTTIKSSTKTSPPPSESTTAERDMTQSTTTQTTRQPTSA AQSTTSTTQSTTTTATTSTTTSGEITRMSTSSATTPQAIHDECPGLPLANTQYCNQLPSTNCVSISTSSSTSKLTTPATT PKADNCLALNIQECANFGQTDTIFPNVFNLTSVQQASAYFYTYNNTVCNDRTLSYLCTLMYPRCINGAPQLPCQQFCLSV QQECPSFVLADSQYCSLLPTNNCFTPLPPASTTTLQTSTVSTTTVKADNCLALNIPECANFGQTDTIFPNMFNLTSVQQA SAYFYTYNNTVCNDRTLSYLCTLMYPRCINGAPQLPCQQFCLNVQQECPSFVLADSQYCSLLPTNNCFTPSVQVSTTTLL TTTVSTTTIKADNCFALNVPECANFGQTDTIFPNVFNLTSVQQASAYFYTYNNTVCNDRTLSYLCTLMYPRCVNGAPQLP CQQFCLSVQQECPSFVLADSQYCSLLPTTNCFSPSVQVSTTTMLTTTPTTTTVIADTYCFLMMPCQNGGTCVDQNGGVDY YCQCQLGFTGRNCDTLGALVKLRECNKVISGHLRQCKLAEKSFPSEAELLSCRAGIWKWKKETDRGTTVCPFHRYNYGIG LRPSMKCGFPNHPVDSRCKPQRGMTAAMCEVAQLRWGFLCRVGTGDSYCFLMSPCKNGGTCVNTDGGAGYYCQCQQGYTG RNCDNLVTTLPPCVQATVPECRNLNVTDIIFPNVFGIPNEAASIPYFTQYRGQSCSENSTYFLCNILFPKCENGRSIRPC KSFCEEVKSNCSGLQIMQAVPCDQLTDTDCVSSLPPPVKDDRPVANAGPDVYLTPPTSSAILNGNLSTDDMGIISYVWAK SPDHAQIVDMEGVATPYLKVSNLGMGDYKFILTVTDTRGQNSSDGIYVYVRQECSSSNQERCPNGKCIMTEWLCDGSDDC TDGWDESNCMRVNNNLDILEMPYGDLHTYLPLCYDSWSESMGTNVCEKLGMRSYITSKRVAFAISQYVAVDSVNGVVNSY VGKLSLRNSCPNNEVVSVQCQPSECGQRKVGPSMVQYVINGYDASPGDWPWQVSIQIQIGDKFRHICGGTLISRDFVLSA AHCTLKYIVQLIRMRVVLGATNRGTPEVTQKIVGIKRQIKYDESYTEYGPGDILLYELEETVPYTPYIQPLCLPDEENKF YKSSECYATGWGYTSPGSGDHTTLLQELKMKLWTISDCNSPIAWNDTVTSGYLCAGYRSGIRSVCTGDSGGPLQCKDNSG IWRLVGISSYVAPNCSGTNKPNVFTDVMQYTSWIRNETRCKFICDNGKCLYDQTMICNRHDDCGDNSDEVRLCTVSANCT FDDPFLCGYKFSEMQWSSGPENSQSAATIPWSDHTIGHYPGKFMVGKTLNFDTNIGNLTSPRFIGISQLCVRFYYNIRGT LFDRLRISAHEYSSSGSLVSTRQVWNSINGEIQDMWRLGYFDLAAGTYALSFVMSDTERVAIDDVFVQHGMCDQYVCKRE ENKCVTSHSPDVTDSVCLPQSSICNVVRECNKDEVNCQVNNTRYFCDFESAMDCGISQVTNDKGEWLLKNQTSLTKSFFS DAFSDHTTGSSSGLMFFLFTYQLVSNGNNVVMTQNLALHNREHCLTFYYRGLTEMTFKIHIESQGVQYDLWSFANRNISW WAKAQVQLPALDKSLLTYEVVRLSKKVHDYYLPHLALDDIEFLPGQCTSYVCPDGYMKCATENFCYPADWRCDRTIHCSD ESDEALCDCTASEFSCGNGRCIEQKLTCDKNFDCLDKSDEGTICEPLKNVSCDFDSPFMCGYTVNETLGETDFRWIRQNG PTPSTFTGPLNDHTQGNSSGYYVYAEGSHGQEGEYAYITSVPFTTSVNQSLTFYYHIYVERPDVVTEGLAVVAKYNDSVS NELWWRNSSTGNVWTYACIDLVPNKNLQIVFVARKQIPSIVGNYDADVAVDDVLLQNQMCAGTVPSTTTPSPVPTITSTP GCAPNEFRCLDGPCIRAELRCDGISDCFDSSDEDNCPS |
|