Gene
| Gene Model ID | pfu_aug2.0_79.1_30137 |
|---|---|
| Locus | scaffold79.1 : 1 ... 40085 : - |
| To GenomeBrowser | scaffold79.1:1..40085 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_10155.1_10083 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30137.t1 | 3 | 1 | MMR_HSR1 | 60 | 133 | 1.5e-08 | 34.5 | 0.58 | 720.0 | 0.1 |
| pfu_aug2.0_79.1_30137.t1 | 3 | 2 | MMR_HSR1 | 224 | 267 | 1.5e-08 | 34.5 | 1.1 | 1400.0 | -0.8 |
| pfu_aug2.0_79.1_30137.t1 | 1 | 1 | Dynamin_N | 457 | 599 | 3.5e-16 | 59.4 | 9.5e-19 | 1.2e-15 | 57.7 |
| pfu_aug2.0_79.1_30137.t1 | 3 | 3 | MMR_HSR1 | 457 | 617 | 1.5e-08 | 34.5 | 4.5e-10 | 5.6e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30137.t1 | gi|524884275|ref|XP_005098759.1| | PREDICTED: uncharacterized protein LOC101861042 isoform X4 [Aplysia californica] | 5.0e-21 |
| pfu_aug2.0_79.1_30137.t1 | gi|524884269|ref|XP_005098756.1| | PREDICTED: uncharacterized protein LOC101861042 isoform X1 [Aplysia californica] | 5.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30137.t1 atggaaactgatgaagacagtttagacgtatctaagatagatacattgaagctcaaagaagcaattggatggatgaaaaa gttgaaaattgacgctaccaacgtaagaagtttgcaggctataagacaaaagttgaaggatcacatagcatctagtaggc atgaaacggacaccagcagccaaatggttggtgccacaggtacgttgtcaaagacatactaccacacgtctgagagtttg acagcgacacaggactctgtgggatatatgagacaacataggagcactgaaaaggtaatggtaaacaagagtgaacttca cacgtatagtaataatgtcgaaaacaagtacagctcatcgctactattgccaagagacataagcaagcaactgaaacaaa atgacaccgatgcattggagtatggaaagattgatgatctgtcatttggagaagcagttgattggatacgaaagttaaac atagaggcaaagcatgtatcaagtcttgaagacatccgattgaaactgaaagaacacttttcagacagacaaagaaacct tgaagcattaactgaaggtgacgctgcttacctgcttacaatgattgttgcattgcccattataatcaatgtttcaatca aattatgcatgaacttggacatgattgaaggatttagagaaaaagacagatcagaaagaggatcggaagaagaatatttt aaggaacgtcataagacatcggaggctttacttaaaactcatgacgatggatataaacaaaaggaatccgatgagaatat gatagtcggtcacgcatccaagatgttcgagaaggaagaacgacataaaggtgattcatggattttcccacaaatagtag agaaaagaggattgcaagcagattttgaaacagaaaacatcgagaagtcatctgacagtttgccattggcaagtagaaat agacagggatcgctagaatccattccgcaggaagattctgatgaagctgaaatagattctctttccctgatggaaatcaa acgtaaagcgaaatctgctcgtattgaaataaagggagtaaaatccgtagcagaagcaagatgccttctgaagaaacatc tcgttaagggtcagaagaaaaggagggaggttatagagcaactttcacatcttgccatggatgatagtgatcaacgaaat gaattacttgcagtgtacaagagtacttatgatgtttttagaagtttaagaggaaaaccattcatggaagaactagcgaa gtttcttaaagaggacaacattgatacaatgctgcaacatctaaagtcggagatagataccctattgacgaaaggatcaa aatcccctgtccttattctaggtcagactggggcagggaaatcttcattcattaacctccttctcggatttgatctcctt cctacccacgtacttagtactaccaataccatatgtgagatccgattcaacgaatcgaaaccagatttatatgaagaagt ctatcactttgaatcgaaaaaaatagtcaaaagaaggagcgagtgcaaagacctccaggatatgattaaaaacagagttc aaatgccaaccagttctgaatttcagaggccatgttgtaaagtagaacttttactaccacgatgtgttgaaatactatca aagacagggatagtacttgtcgatagtcccggcattgcagatactgatgaaatgaccaataaaaccctaggttacagcct tgatgcaacggcattcatattcattctagatacctcagacgcaggcggagtcgctccagaaagggtgaaatcgcaggaaa aagctgcagtttggactgaaatttcaacaaaacttagggaatcatggaaagacatgcagcccgaccaaatgtttcctctc tcaacgcgagatgctatcgagataaataaaaaagaaggcgatgtcgtacttggtaacatgtacaacattatgctgaaaat gatcagcctttcaggagttggaagattaatctccctccataaagctgcatgcttccacataactaacttccctttcatga gtagcaacattccgtctactcctgcttatggcgtttttgtttctcagctgatacggtacgccagggcatgttccaaatat gaagatttaatcataagagccaggcgtcttgcaa |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30137.t1 METDEDSLDVSKIDTLKLKEAIGWMKKLKIDATNVRSLQAIRQKLKDHIASSRHETDTSSQMVGATGTLSKTYYHTSESL TATQDSVGYMRQHRSTEKVMVNKSELHTYSNNVENKYSSSLLLPRDISKQLKQNDTDALEYGKIDDLSFGEAVDWIRKLN IEAKHVSSLEDIRLKLKEHFSDRQRNLEALTEGDAAYLLTMIVALPIIINVSIKLCMNLDMIEGFREKDRSERGSEEEYF KERHKTSEALLKTHDDGYKQKESDENMIVGHASKMFEKEERHKGDSWIFPQIVEKRGLQADFETENIEKSSDSLPLASRN RQGSLESIPQEDSDEAEIDSLSLMEIKRKAKSARIEIKGVKSVAEARCLLKKHLVKGQKKRREVIEQLSHLAMDDSDQRN ELLAVYKSTYDVFRSLRGKPFMEELAKFLKEDNIDTMLQHLKSEIDTLLTKGSKSPVLILGQTGAGKSSFINLLLGFDLL PTHVLSTTNTICEIRFNESKPDLYEEVYHFESKKIVKRRSECKDLQDMIKNRVQMPTSSEFQRPCCKVELLLPRCVEILS KTGIVLVDSPGIADTDEMTNKTLGYSLDATAFIFILDTSDAGGVAPERVKSQEKAAVWTEISTKLRESWKDMQPDQMFPL STRDAIEINKKEGDVVLGNMYNIMLKMISLSGVGRLISLHKAACFHITNFPFMSSNIPSTPAYGVFVSQLIRYARACSKY EDLIIRARRLA |
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