Gene
| Gene Model ID | pfu_aug2.0_79.1_30146 |
|---|---|
| Locus | scaffold79.1 : 213115 ... 223974 : + |
| To GenomeBrowser | scaffold79.1:213115..223974 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_37079.1_12274 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30146.t1 | 2 | 1 | UQ_con | 9 | 146 | 2.3e-32 | 111.3 | 2.8e-36 | 4.2e-32 | 110.4 |
| pfu_aug2.0_79.1_30146.t1 | 2 | 2 | UQ_con | 291 | 306 | 2.3e-32 | 111.3 | 0.15 | 2300.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30146.t1 | gi|524903683|ref|XP_005108036.1| | PREDICTED: ubiquitin-conjugating enzyme E2 U-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_79.1_30146.t1 | gi|291224737|ref|XP_002732357.1| | PREDICTED: ubiquitin-conjugating enzyme E2 U-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_79.1_30146.t1 | gi|260813398|ref|XP_002601405.1| | hypothetical protein BRAFLDRAFT_130394 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_79.1_30146.t1 | gi|632990625|ref|XP_007884253.1| | PREDICTED: ubiquitin-conjugating enzyme E2 U, partial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_79.1_30146.t1 | gi|557324145|ref|XP_006035116.1| | PREDICTED: ubiquitin-conjugating enzyme E2 U [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30146.t1 atgctctccagagctcatcttctcattgaaaaagaaatcaggaaacttcaggaaaatgcaccctggggaatagaagcctc tcctatacaagaagacaatatttttgaatggtcagccagaatcaaaggattaaaagattctctatgggaaggaggtatat ttagagtttacatcaaatttgatgaacatttcaacagacggccaccagaggtttgcttccacaccattccctttcatcca aatgttgaggccataaccgggaagccgtgcattgacttccttgatgacttttcaatatggagagatacatatagtctgtc ttttattttagtctcaattcagaatctactgtcaaatcccaacctgaaaaacccagtaaatcccgaagctgcggacatga ttgtacattccccccatgcttatagacagatggtgcttgactgtgtaacagctagccagagagtagaggctggagttacc ccccatgcagagttggaatcacgagtcagatttgcctcccctatggatgaaccaaagcgatactctgctgtagctaacac gcccagagccacggccgtaaccaaggtttccaggctgtcgttcgaggattatcacaatacatggtgtggtatagcaacgt ctaaacccgtacaagattccaaaaacccatttttagagagcctgaaggagaatccttccttacagagagctcatcttggt ctgccccaggaggaaatacaggaccaaatgaaaaggcagctagaggaacatcaggcattgatgtatggtaactttaagat gcagccctctgaggaggaagagaaagcagctaagctggccaggttgtcaaaaatgaaaaagatctacctaccgcccagga tctcacctacaccctccgctcaacatcctaataccaagggggaagaggaaccatgggaagaagaagtagaggatctggtc aactggtcatctaagctggacactgaggccatagacgtctga |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30146.t1 MLSRAHLLIEKEIRKLQENAPWGIEASPIQEDNIFEWSARIKGLKDSLWEGGIFRVYIKFDEHFNRRPPEVCFHTIPFHP NVEAITGKPCIDFLDDFSIWRDTYSLSFILVSIQNLLSNPNLKNPVNPEAADMIVHSPHAYRQMVLDCVTASQRVEAGVT PHAELESRVRFASPMDEPKRYSAVANTPRATAVTKVSRLSFEDYHNTWCGIATSKPVQDSKNPFLESLKENPSLQRAHLG LPQEEIQDQMKRQLEEHQALMYGNFKMQPSEEEEKAAKLARLSKMKKIYLPPRISPTPSAQHPNTKGEEEPWEEEVEDLV NWSSKLDTEAIDV |
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