Gene
| Gene Model ID | pfu_aug2.0_79.1_30149 |
|---|---|
| Locus | scaffold79.1 : 262195 ... 286524 : + |
| To GenomeBrowser | scaffold79.1:262195..286524 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_14894.1_18176 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30149.t1 | 2 | 1 | Cache_1 | 200 | 269 | 4.5e-22 | 77.3 | 2.2e-16 | 3.2e-12 | 45.8 |
| pfu_aug2.0_79.1_30149.t1 | 2 | 2 | Cache_1 | 510 | 591 | 4.5e-22 | 77.3 | 4.2e-11 | 6.2e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30149.t1 | gi|706127339|ref|XP_010198519.1| | PREDICTED: VWFA and cache domain-containing protein 1, partial [Colius striatus] | 0.0 |
| pfu_aug2.0_79.1_30149.t1 | gi|528482620|ref|XP_001334829.3| | PREDICTED: VWFA and cache domain-containing protein 1 [Danio rerio] | 0.0 |
| pfu_aug2.0_79.1_30149.t1 | gi|584057539|ref|XP_006773296.1| | PREDICTED: VWFA and cache domain-containing protein 1 [Myotis davidii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30149.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30149.t1 atgcagcccaaagaccagcttattgtgttggtatttttcggccttgcgtctggacctacgtttccacgtgatcccaggga tgattcctgcttaccaaactccctcgtgccgcttacgtacgaagccagtcttttcttcagcaactttattgacaacttgg aaaaagaggattcttcaacaaaccattcattaggatttgagacagcttttgatatgatagaaaatatgattcacagaagt aaaggctttaacatagagaatccgatgataatctacatcagtcgtggtttgttatcatcgatagcggaggccaaggacgt catggaaaccatagctatacataacggacgacttcaacataaagtcgttatcgatacattcgcagtcatagatgatggaa aacctataatgctagaaaagagcttccttcaggacatagccgagcagaactttgataaatataaagtacagtacaggagt aatcatccagttacaactggaatgatgtcagccattaactccactaaggatctgatcatcaccgtaggaaagttttacca gccgttaaaccggacagtctctgagttcccagtattctctatgccgtacatcgatgaggcagacaatgccctgacaatga gtatcagtcagccctgtctccatggcgatgagttttttggggtgatgggtgtggatttgcacatggaggacatcgtacag gatgtgacgtattacagcaaggataccggctcctactcctttatcatcaataatgaaggttatactataatgcatccctc atttagccgacctgtcaaaaccaggatccagcccatgcacacagacatttggcattttgagaattatgacggttttgccc gcgtcaggagtgacatgctcaacatggatgaaggggagagaaccctgtatgtacagcctgacgggaaaaacaacgtaaca aacattcaagtctatgccaagttctactggaaaaagattgagagtacaccgttcattgtagtcctgaaagttttatcaca aacaaatgaatacagacagctggagaatttacatgtatccagtgatccccagcttgtgtaccatcggctggacttagtac cgaccagtatgatgtgtttacatcgtaaccagctggccacgcccgagataagtaccgtcttcctctctgcaaaaagtttc ttggatccatttgaacatctgagtaacaaagagacgaaacgtatggttcagaactacatagcttaccttaaagatgacac acggcttatcaccaaccctggactcaaggagaatgtacgtaatgatgtagctgccacagggaggattaacactgagtggt taaggcggtaccacaccagtgtcatgaaggagaccatcgtacgacgcttcattgccacgcctagtggagttctccgtagc tttccaggggcactcctagataaagcctttgatcctactaaacggaaatggtataccagagcattgaagtttccaggtca tgtgactctgacgcctccatatttagacgtgctaggatctggttatattacaacaataagcggtactatatttgagggaa aacgtgcggcgttacacagcccgtcagatccagtagtagctgtgatgggtatggacataacactgggacacctccacaaa ctcttgtacgacaacattgccgtgtgtcgtcaggcgacggtacgatgctttatcatggatgacaggggctatctggttgc acatccctcgttagtggaacctaacggtaaaggtccactacaggaacagcatatcactcatcaggaacccttggtggcca atgacatcctaaatcatcgtcacttcgtacacaagacactgtgtaacaaatataacgataggaccatacagaggtattac cattttaacacgagcctagacggaatactgacaaacttggtacatggagagcagtgtgctagatatcagatcaccaaaat tcctggaaccaacgccttccttggacatacaaattttgtgttagcaacatttgagaatcctgccagtgtttctccgtaca gagtgaatacctcttatagacgtccagcagggggcgacagcgaccatggttatagcaccatgacaccacacgaagacagt gaacacgcgagtctcccctgcttagaaccgttaattatcggtaaagaccgttacaaaccggggtcgttatctgtagtgaa gactcccggaaagttacctccccctcccagtagtagtaggcggagtcgttcccctacccccccacagactcgttaccctg gctatcagccaataccagaacaaacagtgctaccctgtcagacagtgattaacacacccataccggaggttatcaataat gtcatagctaaagtacaagtacacatggtagacacacactga |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30149.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30149.t1 MQPKDQLIVLVFFGLASGPTFPRDPRDDSCLPNSLVPLTYEASLFFSNFIDNLEKEDSSTNHSLGFETAFDMIENMIHRS KGFNIENPMIIYISRGLLSSIAEAKDVMETIAIHNGRLQHKVVIDTFAVIDDGKPIMLEKSFLQDIAEQNFDKYKVQYRS NHPVTTGMMSAINSTKDLIITVGKFYQPLNRTVSEFPVFSMPYIDEADNALTMSISQPCLHGDEFFGVMGVDLHMEDIVQ DVTYYSKDTGSYSFIINNEGYTIMHPSFSRPVKTRIQPMHTDIWHFENYDGFARVRSDMLNMDEGERTLYVQPDGKNNVT NIQVYAKFYWKKIESTPFIVVLKVLSQTNEYRQLENLHVSSDPQLVYHRLDLVPTSMMCLHRNQLATPEISTVFLSAKSF LDPFEHLSNKETKRMVQNYIAYLKDDTRLITNPGLKENVRNDVAATGRINTEWLRRYHTSVMKETIVRRFIATPSGVLRS FPGALLDKAFDPTKRKWYTRALKFPGHVTLTPPYLDVLGSGYITTISGTIFEGKRAALHSPSDPVVAVMGMDITLGHLHK LLYDNIAVCRQATVRCFIMDDRGYLVAHPSLVEPNGKGPLQEQHITHQEPLVANDILNHRHFVHKTLCNKYNDRTIQRYY HFNTSLDGILTNLVHGEQCARYQITKIPGTNAFLGHTNFVLATFENPASVSPYRVNTSYRRPAGGDSDHGYSTMTPHEDS EHASLPCLEPLIIGKDRYKPGSLSVVKTPGKLPPPPSSSRRSRSPTPPQTRYPGYQPIPEQTVLPCQTVINTPIPEVINN VIAKVQVHMVDTH |
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