Gene
Gene Model ID | pfu_aug2.0_79.1_30150 |
---|---|
Locus | scaffold79.1 : 297835 ... 300360 : + |
To GenomeBrowser | scaffold79.1:297835..300360 |
Genes list of scaffold | scaffold79.1 |
Synonym | pfu_aug1.0_352.1_36511 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_79.1_30150.t1 | 1 | 1 | Actin | 4 | 370 | 0.0 | 478.2 | 0.0 | 0.0 | 478.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_79.1_30150.t1 | gi|525328749|gb|AGR44838.1| | actin-4 [Bombyx mori] | 0.0 |
pfu_aug2.0_79.1_30150.t1 | gi|525328751|gb|AGR44839.1| | actin-4 [Bombyx mori] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_79.1_30150.t1 |
---|---|
Definition | - |
>pfu_aug2.0_79.1_30150.t1 atggcagatgaagacgttgcagctttagtcattgacaatggatctggtatgtgcaaggctggggtcgcaggagacgatgc ccctcgtatcgtctttccttccatcgtcggcagacccaagtatttggggatgccggatgtgaattatgtaggagacaagg caagaagtaaaagtgctatcctcaccctcaaataccccattgaacacggtattgtcacaaactgggacgatatggagaag atctggcatcataccttctacaatgaactccgtgtggcccccgaggaacacccagttctcctgactgaagctccacttag cccaaaggcaaacaaagaaaagatggcacagatcatgtttgaaactttcaactgtcccgccatgtacgtagctatccagg ccgtactgtcactgtacgcctctggtcgtactacaggtatcgtactggactctggggatggtatcacaaccacagtaccc atcaacgaggcacgagccttaccgtactctagcaacaagttagattttgccggacgtgacctcacagattacctaacgat gctgattcatgatcgtggcaactcgttcaccaccacagctgagagagaaatcgtcagagacattaaagaaaaattttgtt atgttgccttggactttgaacaagaaatggctacagctgcgtcatcatcatctatagagaagagttacgaacttcccgac ggtcaggtcatcaccattggtaacgaaaggttcaaatgtaccgaagctttatttcagccatctttcgtcggtatggacta tcctggtatccacgaaacaatatacaacagtatcaagaaatatgacggagacattatgaaaaaactgtactctaacgtcg tattatcaggcggtaccactatatgcccaggtttcgttgatcgtatgcagaaagaaatcacagctcttgctccaagcaca atggaaatcaaagttatagctccaccagagaggaaatactcagtttggattggtggatctatcctcgcttatcttccctc cttccagcagatgtggatcaacaaacaggcatacgaggagtccggtccatctatcgtacacaggaagtgttggtaa |
Protein
Protein ID | pfu_aug2.0_79.1_30150.t1 |
---|---|
Definition | - |
>pfu_aug2.0_79.1_30150.t1 MADEDVAALVIDNGSGMCKAGVAGDDAPRIVFPSIVGRPKYLGMPDVNYVGDKARSKSAILTLKYPIEHGIVTNWDDMEK IWHHTFYNELRVAPEEHPVLLTEAPLSPKANKEKMAQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGITTTVP INEARALPYSSNKLDFAGRDLTDYLTMLIHDRGNSFTTTAEREIVRDIKEKFCYVALDFEQEMATAASSSSIEKSYELPD GQVITIGNERFKCTEALFQPSFVGMDYPGIHETIYNSIKKYDGDIMKKLYSNVVLSGGTTICPGFVDRMQKEITALAPST MEIKVIAPPERKYSVWIGGSILAYLPSFQQMWINKQAYEESGPSIVHRKCW |