Gene
| Gene Model ID | pfu_aug2.0_79.1_30152 |
|---|---|
| Locus | scaffold79.1 : 315685 ... 318549 : + |
| To GenomeBrowser | scaffold79.1:315685..318549 |
| Genes list of scaffold | scaffold79.1 |
| Synonym | pfu_aug1.0_352.1_36513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_79.1_30152.t1 | 1 | 1 | Actin | 1 | 360 | 0.0 | 519.5 | 0.0 | 0.0 | 519.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_79.1_30152.t1 | gi|383853395|ref|XP_003702208.1| | PREDICTED: actin-5C [Megachile rotundata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_79.1_30152.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30152.t1 atgtgcaaggctgggttcgcaggagacgatgcccctcgtgccgtcttcccctccatcgtaggcagacccaggcatcaggg tgtgatggttggtatgggacagaaggacagctatgtaggagacgaggcccagagtaagagaggtatcctcaccctcaaat accccattgaacacggtattgtcacaaactgggacgatatggagaagatctggcatcataccttctacaatgaactccga gtggcccccgaggaacaccctgttctcttgactgaggctccactcaacccaaaggcaaacagagaaaagatgacacagat catgtttgaaaccttcaactctcccgccatgtacgtagctatccaagccgtgctctcactgtacgcttccggtcgtacta caggtatcgtactggactctggggatggggtatcacacacagtaccaatctacgaaggatacgcccttccccacgccatc atgagattagatcttgctggacgtgatctcacagattacctcatgaagatcctcacagagcgtggctactcgttcaccac cacagccgagagagaaatcgtcagagacatcaaagaaaaattgtgttatgttgccttggactttgaacaagaaatggcta ccgccgcgtcatcatcatctttagagaagagttacgaacttcccgacggtcaggtcatcaccattggtaacgaaaggttc agatgtcccgaggctttattccagccatctttcctcggtatggaatctgcaggtatccacgaaacaacatacaacagtat aatgaagtgtgacgtagacattcgtaaagacttgtacgctaacaccgtgttatcaggcggtaccactatgtacccaggta tcgctgaccgtatgcagaaagaaatcacatctcttgctccaagcacaatgaaaatcaaagttatagctccaccagagagg aaatactcagtttggattggtggatctatcctcgcttctctctccaccttccagcagatgtggatcagcaaacaggaata cgacgagtccggtccatccatcgtccacaggaaatgcttctaa |
|
Protein
| Protein ID | pfu_aug2.0_79.1_30152.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_79.1_30152.t1 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI MRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERF RCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKVIAPPER KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF |
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